Aniseed - Gene card

External Database Gene Card

External database links

5 results

Database	Gene ID
ENSEMBL	ENSCING00000006521
ENSEMBL	ENSCING00000023845
ENSEMBL	ENSCING00000024069
NCBI Reference Sequence	XM_009862945.1
NCBI Reference Sequence	XR_717596.2

Collections

Gateway full ORF

4 results

Gene collection 1 (N. Satoh)

3 results

citb040j18

Plate: R1CiGC32l06

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

7 results

IPR Term	Analysis	Definition
RhoGAP_dom	Pfam	Rho GTPase-activating protein domain
Rho_GTPase_activation_prot	Gene3D	Rho GTPase activation protein
PE/DAG-bd	ProSiteProfiles	Protein kinase C-like, phorbol ester/diacylglycerol-binding domain
RhoGAP_dom	ProSiteProfiles	Rho GTPase-activating protein domain
Rho_GTPase_activation_prot	SUPERFAMILY	Rho GTPase activation protein
PE/DAG-bd	ProSitePatterns	Protein kinase C-like, phorbol ester/diacylglycerol-binding domain
RhoGAP_dom	SMART	Rho GTPase-activating protein domain

GOSlim

47 results

GO Term	Annotation Origin	Type
GTPase activator activity	Orthology	molecular function
protein binding	Orthology	molecular function
intracellular	Blast	cellular component
nucleus	Orthology	cellular component
nucleoplasm	Orthology	cellular component
cytoplasm	Orthology	cellular component
cytosol	Orthology	cellular component
cytoskeleton	Orthology	cellular component
microtubule	Orthology	cellular component
plasma membrane	Orthology	cellular component
ion transport	Orthology	biological process
microtubule-based movement	Orthology	biological process
cell cycle	Orthology	biological process
signal transduction	Orthology	biological process
small GTPase mediated signal transduction	Orthology	biological process
multicellular organism development	Orthology	biological process
spermatogenesis	Orthology	biological process
microtubule binding	Orthology	molecular function
membrane	Orthology	cellular component
protein kinase binding	Orthology	molecular function
cell differentiation	Orthology	biological process
midbody	Orthology	cellular component
cytoplasmic vesicle	Orthology	cellular component
intracellular signal transduction	Orthology	biological process
positive regulation of GTPase activity	Orthology	biological process
metal ion binding	Orthology	molecular function
cell division	Orthology	biological process
extracellular exosome	Orthology	cellular component
membrane organization	Orthology	biological process
organelle organization	Orthology	biological process
endomembrane system	Orthology	cellular component
anion binding	Orthology	molecular function
cytoskeletal part	Orthology	cellular component
microtubule cytoskeleton	Orthology	cellular component
cell proliferation	Orthology	biological process
generation of neurons	Orthology	biological process
binding	Orthology	molecular function
immune system process	Orthology	biological process
intracellular part	Orthology	cellular component
plasma membrane part	Orthology	cellular component
plasma membrane region	Orthology	cellular component
tubulin binding	Orthology	molecular function
regulation of signal transduction	Orthology	biological process
microtubule-based process	Orthology	biological process
macromolecular complex	Orthology	cellular component
enzyme binding	Blast	molecular function
molecular function regulator	Blast	molecular function

GO (Orthology)

50 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
mitotic cytokinesis	Hs	biological process
actomyosin contractile ring assembly	Hs	biological process
acrosomal vesicle	Hs	cellular component
GTPase activator activity	Hs	molecular function
protein binding	Hs	molecular function
phosphatidylinositol-3,4,5-trisphosphate binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
cytoplasm	Hs	cellular component
spindle	Hs	cellular component
cytosol	Hs	cellular component
cytoskeleton	Hs	cellular component
microtubule	Hs	cellular component
plasma membrane	Hs	cellular component
ion transport	Hs	biological process
retrograde vesicle-mediated transport, Golgi to ER	Hs	biological process
microtubule-based movement	Hs	biological process
cell cycle	Hs	biological process
signal transduction	Hs	biological process
multicellular organism development	Hs	biological process
spermatogenesis	Hs	biological process
neuroblast proliferation	Hs	biological process
microtubule binding	Hs	molecular function
sulfate transport	Hs	biological process
lipid binding	Hs	molecular function
membrane	Hs	cellular component
antigen processing and presentation of exogenous peptide antigen via MHC class II	Hs	biological process
protein kinase binding	Hs	molecular function
cell differentiation	Hs	biological process
midbody	Hs	cellular component
extrinsic component of cytoplasmic side of plasma membrane	Hs	cellular component
cytoplasmic vesicle	Hs	cellular component
cleavage furrow	Hs	cellular component
positive regulation of cytokinesis	Hs	biological process
intracellular signal transduction	Hs	biological process
alpha-tubulin binding	Hs	molecular function
gamma-tubulin binding	Hs	molecular function
positive regulation of GTPase activity	Hs	biological process
regulation of embryonic development	Hs	biological process
metal ion binding	Hs	molecular function
beta-tubulin binding	Hs	molecular function
regulation of small GTPase mediated signal transduction	Hs	biological process
spindle midzone	Hs	cellular component
mitotic spindle midzone assembly	Hs	biological process
cell division	Hs	biological process
regulation of attachment of spindle microtubules to kinetochore	Hs	biological process
extracellular exosome	Hs	cellular component
mitotic spindle	Hs	cellular component
Flemming body	Hs	cellular component
centralspindlin complex	Hs	cellular component

GO (Blast)

32 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
acrosomal vesicle	Hs	cellular component	318	1.18e-100
guanyl-nucleotide exchange factor activity	Hs	molecular function	82.4	2.80e-16
Rho guanyl-nucleotide exchange factor activity	Hs	molecular function	82.4	2.80e-16
GTPase activator activity	Hs	molecular function	318	1.18e-100
protein binding	Hs	molecular function	318	1.18e-100
phosphatidylinositol-3,4,5-trisphosphate binding	Hs	molecular function	318	1.18e-100
intracellular	Hs	cellular component	82.4	2.80e-16
nucleus	Hs	cellular component	318	1.18e-100
nucleoplasm	Hs	cellular component	318	1.18e-100
cytoplasm	Hs	cellular component	318	1.18e-100
spindle	Hs	cellular component	318	1.18e-100
cytosol	Hs	cellular component	318	1.18e-100
cytoskeleton	Hs	cellular component	318	1.18e-100
microtubule	Hs	cellular component	318	1.18e-100
plasma membrane	Hs	cellular component	318	1.18e-100
microtubule binding	Hs	molecular function	318	1.18e-100
lipid binding	Hs	molecular function	318	1.18e-100
membrane	Hs	cellular component	318	1.18e-100
protein kinase binding	Hs	molecular function	318	1.18e-100
midbody	Hs	cellular component	318	1.18e-100
extrinsic component of cytoplasmic side of plasma membrane	Hs	cellular component	318	1.18e-100
cytoplasmic vesicle	Hs	cellular component	318	1.18e-100
cleavage furrow	Hs	cellular component	318	1.18e-100
alpha-tubulin binding	Hs	molecular function	318	1.18e-100
gamma-tubulin binding	Hs	molecular function	318	1.18e-100
metal ion binding	Hs	molecular function	318	1.18e-100
beta-tubulin binding	Hs	molecular function	318	1.18e-100
spindle midzone	Hs	cellular component	318	1.18e-100
extracellular exosome	Hs	cellular component	318	1.18e-100
mitotic spindle	Hs	cellular component	318	1.18e-100
Flemming body	Hs	cellular component	318	1.18e-100
centralspindlin complex	Hs	cellular component	318	1.18e-100

GO (InterProScan)

2 results

GO Term	Analysis	Type	e-value
signal transduction	Gene3D	biological process	2.4E-42
intracellular signal transduction	ProSiteProfiles	biological process	9.213

Gene Card

Best human hits

Species

Unique Gene ID

Gene Model ID

Location

Transcript Models and Sequences

External database links

Gateway full ORF

cima817836

cima828828

cima865626

cima869895