Login
Help

GENE CARD

Submit your Data

Gene Card

Best human hits

PKD1; PKD1L1; PKD1L3

Species

M.occidentalis

Unique Gene ID

Moocci.g00002578

Gene Model ID

Moocci.CG.ELv1_2.S147044.g02578

Location

S147044:4239..25536

Transcript Models and Sequences

  Moocci.CG.ELv1_2.S147044.g02578.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

11 results

IPR Term Analysis Definition
PKD_dom_sf SUPERFAMILY PKD domain superfamily
WSC_carb-bd Pfam Carbohydrate-binding WSC
PKD_dom ProSiteProfiles PKD domain
PLAT/LH2_dom_sf SUPERFAMILY PLAT/LH2 domain superfamily
WSC_carb-bd SMART Carbohydrate-binding WSC
PLAT/LH2_dom ProSiteProfiles PLAT/LH2 domain
WSC_carb-bd ProSiteProfiles Carbohydrate-binding WSC
Ig-like_fold Gene3D Immunoglobulin-like fold
PKD/Chitinase_dom SMART PKD/Chitinase domain
PLAT/LH2_dom Pfam PLAT/LH2 domain
PKD/REJ-like Pfam PKD/REJ-like domain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

31 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
Golgi membrane Hs cellular component 83.2 4.61e-15
polycystin complex Hs cellular component 83.2 4.61e-15
cation channel activity Hs molecular function 74.3 1.93e-12
calcium channel activity Hs molecular function 106 4.95e-22
protein binding Hs molecular function 106 4.95e-22
nucleus Hs cellular component 83.2 4.61e-15
cytoplasm Hs cellular component 83.2 4.61e-15
Golgi apparatus Hs cellular component 83.2 4.61e-15
plasma membrane Hs cellular component 106 4.95e-22
integral component of plasma membrane Hs cellular component 83.2 4.61e-15
cilium Hs cellular component 106 4.95e-22
cation transmembrane transporter activity Hs molecular function 74.3 1.93e-12
cell surface Hs cellular component 83.2 4.61e-15
membrane Hs cellular component 106 4.95e-22
integral component of membrane Hs cellular component 106 4.95e-22
basolateral plasma membrane Hs cellular component 83.2 4.61e-15
lateral plasma membrane Hs cellular component 83.2 4.61e-15
protein kinase binding Hs molecular function 83.2 4.61e-15
protein domain specific binding Hs molecular function 83.2 4.61e-15
carbohydrate binding Hs molecular function 83.2 4.61e-15
Golgi-associated vesicle membrane Hs cellular component 83.2 4.61e-15
motile cilium Hs cellular component 83.2 4.61e-15
sour taste receptor activity Hs molecular function 74.3 1.93e-12
cation channel complex Hs cellular component 74.3 1.93e-12
calcium channel complex Hs cellular component 106 4.95e-22
cell projection Hs cellular component 106 4.95e-22
receptor complex Hs cellular component 74.3 1.93e-12
ion channel binding Hs molecular function 83.2 4.61e-15
ciliary membrane Hs cellular component 106 4.95e-22
extracellular exosome Hs cellular component 83.2 4.61e-15
non-motile cilium Hs cellular component 106 4.95e-22

GO (InterProScan)

1 result

GO Term Analysis Type e-value
protein binding SUPERFAMILY molecular function 5.96E-20