Login
Help

GENE CARD

Submit your Data

Gene Card

Best human hits

FMR1; FXR1; FXR2

Species

M.occidentalis

Unique Gene ID

Moocci.g00016444

Gene Model ID

Moocci.CG.ELv1_2.S475518.g16444

Location

S475518:68740..71778

Transcript Models and Sequences

  Moocci.CG.ELv1_2.S475518.g16444.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree
 Click here to see the tree inference method

Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
KH_dom_type_1_sf Gene3D K Homology domain, type 1 superfamily
KH_dom SMART K Homology domain
FXMRP1_C_core Pfam Fragile X-related 1 protein, C-terminal core
KH_dom_type_1 Pfam K Homology domain, type 1
Agenet-like_dom ProSiteProfiles Agenet-like domain
KH_dom_type_1_sf SUPERFAMILY K Homology domain, type 1 superfamily

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

104 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
regulation of alternative mRNA splicing, via spliceosome Hs biological process
chromosome, centromeric region Hs cellular component
positive regulation of receptor internalization Hs biological process
G-quadruplex RNA binding Hs molecular function
nucleic acid binding Hs molecular function
chromatin binding Hs molecular function
RNA binding Hs molecular function
mRNA binding Hs molecular function
mRNA 3'-UTR binding Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
chromosome Hs cellular component
nucleolus Hs cellular component
cytoplasm Hs cellular component
cytosol Hs cellular component
polysome Hs cellular component
mRNA cap binding complex Hs cellular component
plasma membrane Hs cellular component
mRNA processing Hs biological process
regulation of translation Hs biological process
apoptotic process Hs biological process
cellular response to DNA damage stimulus Hs biological process
multicellular organism development Hs biological process
nervous system development Hs biological process
muscle organ development Hs biological process
microtubule binding Hs molecular function
poly(U) RNA binding Hs molecular function
RNA splicing Hs biological process
chromocenter Hs cellular component
cytoplasmic stress granule Hs cellular component
postsynaptic density Hs cellular component
Cajal body Hs cellular component
membrane Hs cellular component
viral process Hs biological process
negative regulation of translation Hs biological process
viral replication complex Hs cellular component
extrinsic component of plasma membrane Hs cellular component
cytosolic large ribosomal subunit Hs cellular component
cell junction Hs cellular component
cell differentiation Hs biological process
translation repressor activity Hs molecular function
axon Hs cellular component
dendrite Hs cellular component
growth cone Hs cellular component
intracellular ribonucleoprotein complex Hs cellular component
gene silencing by RNA Hs biological process
translation initiation factor binding Hs molecular function
filopodium tip Hs cellular component
SMN complex Hs cellular component
positive regulation of histone phosphorylation Hs biological process
RNA strand annealing activity Hs molecular function
poly(G) binding Hs molecular function
cellular response to UV Hs biological process
methylated histone binding Hs molecular function
siRNA binding Hs molecular function
miRNA binding Hs molecular function
RNA stem-loop binding Hs molecular function
ribonucleoprotein granule Hs cellular component
cytoplasmic ribonucleoprotein granule Hs cellular component
presynaptic membrane Hs cellular component
polysomal ribosome Hs cellular component
identical protein binding Hs molecular function
protein homodimerization activity Hs molecular function
cell projection Hs cellular component
neuron projection Hs cellular component
ribosome binding Hs molecular function
costamere Hs cellular component
dendritic spine Hs cellular component
perikaryon Hs cellular component
regulation of mRNA stability Hs biological process
axon terminus Hs cellular component
ion channel binding Hs molecular function
synapse Hs cellular component
postsynaptic membrane Hs cellular component
positive regulation of translation Hs biological process
negative regulation of translational initiation Hs biological process
regulation of neurotransmitter secretion Hs biological process
protein heterodimerization activity Hs molecular function
mRNA 5'-UTR binding Hs molecular function
perinuclear region of cytoplasm Hs cellular component
mRNA transport Hs biological process
regulation of filopodium assembly Hs biological process
positive regulation of filopodium assembly Hs biological process
regulation of gene silencing by miRNA Hs biological process
positive regulation of dendritic spine development Hs biological process
extracellular exosome Hs cellular component
dynein complex binding Hs molecular function
neuronal ribonucleoprotein granule Hs cellular component
glial cell projection Hs cellular component
cellular response to virus Hs biological process
presynapse Hs cellular component
postsynapse Hs cellular component
negative regulation of voltage-gated calcium channel activity Hs biological process
positive regulation of proteasomal protein catabolic process Hs biological process
dendritic filopodium Hs cellular component
messenger ribonucleoprotein complex Hs cellular component
growth cone filopodium Hs cellular component
sequence-specific mRNA binding Hs molecular function
ribonucleoprotein complex Hs cellular component
negative regulation of synaptic vesicle exocytosis Hs biological process
positive regulation of gene silencing by miRNA Hs biological process
negative regulation of cytoplasmic translation Hs biological process
positive regulation of response to DNA damage stimulus Hs biological process

GO (Blast)

72 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
chromosome, centromeric region Hs cellular component 362 1.36e-117
G-quadruplex RNA binding Hs molecular function 419 8.04e-140
nucleic acid binding Hs molecular function 421 1.24e-139
chromatin binding Hs molecular function 362 1.36e-117
RNA binding Hs molecular function 421 1.24e-139
mRNA binding Hs molecular function 421 1.24e-139
mRNA 3'-UTR binding Hs molecular function 419 8.04e-140
protein binding Hs molecular function 421 1.24e-139
nucleus Hs cellular component 421 1.24e-139
nucleoplasm Hs cellular component 362 1.36e-117
chromosome Hs cellular component 362 1.36e-117
nucleolus Hs cellular component 419 8.04e-140
cytoplasm Hs cellular component 421 1.24e-139
cytosol Hs cellular component 421 1.24e-139
polysome Hs cellular component 421 1.24e-139
mRNA cap binding complex Hs cellular component 362 1.36e-117
plasma membrane Hs cellular component 362 1.36e-117
microtubule binding Hs molecular function 362 1.36e-117
poly(U) RNA binding Hs molecular function 362 1.36e-117
chromocenter Hs cellular component 362 1.36e-117
cytoplasmic stress granule Hs cellular component 362 1.36e-117
postsynaptic density Hs cellular component 362 1.36e-117
Cajal body Hs cellular component 362 1.36e-117
membrane Hs cellular component 421 1.24e-139
viral replication complex Hs cellular component 362 1.36e-117
extrinsic component of plasma membrane Hs cellular component 362 1.36e-117
cytosolic large ribosomal subunit Hs cellular component 421 1.24e-139
cell junction Hs cellular component 362 1.36e-117
translation repressor activity Hs molecular function 362 1.36e-117
axon Hs cellular component 419 8.04e-140
dendrite Hs cellular component 419 8.04e-140
growth cone Hs cellular component 362 1.36e-117
intracellular ribonucleoprotein complex Hs cellular component 362 1.36e-117
translation initiation factor binding Hs molecular function 362 1.36e-117
filopodium tip Hs cellular component 362 1.36e-117
SMN complex Hs cellular component 362 1.36e-117
RNA strand annealing activity Hs molecular function 419 8.04e-140
poly(G) binding Hs molecular function 362 1.36e-117
methylated histone binding Hs molecular function 362 1.36e-117
siRNA binding Hs molecular function 362 1.36e-117
miRNA binding Hs molecular function 362 1.36e-117
RNA stem-loop binding Hs molecular function 362 1.36e-117
ribonucleoprotein granule Hs cellular component 419 8.04e-140
cytoplasmic ribonucleoprotein granule Hs cellular component 362 1.36e-117
presynaptic membrane Hs cellular component 362 1.36e-117
polysomal ribosome Hs cellular component 362 1.36e-117
identical protein binding Hs molecular function 421 1.24e-139
protein homodimerization activity Hs molecular function 421 1.24e-139
cell projection Hs cellular component 362 1.36e-117
neuron projection Hs cellular component 362 1.36e-117
ribosome binding Hs molecular function 362 1.36e-117
costamere Hs cellular component 419 8.04e-140
dendritic spine Hs cellular component 419 8.04e-140
perikaryon Hs cellular component 362 1.36e-117
axon terminus Hs cellular component 362 1.36e-117
ion channel binding Hs molecular function 362 1.36e-117
synapse Hs cellular component 362 1.36e-117
postsynaptic membrane Hs cellular component 362 1.36e-117
protein heterodimerization activity Hs molecular function 421 1.24e-139
mRNA 5'-UTR binding Hs molecular function 362 1.36e-117
perinuclear region of cytoplasm Hs cellular component 419 8.04e-140
extracellular exosome Hs cellular component 421 1.24e-139
dynein complex binding Hs molecular function 362 1.36e-117
neuronal ribonucleoprotein granule Hs cellular component 362 1.36e-117
glial cell projection Hs cellular component 362 1.36e-117
presynapse Hs cellular component 362 1.36e-117
postsynapse Hs cellular component 362 1.36e-117
dendritic filopodium Hs cellular component 362 1.36e-117
messenger ribonucleoprotein complex Hs cellular component 362 1.36e-117
growth cone filopodium Hs cellular component 362 1.36e-117
sequence-specific mRNA binding Hs molecular function 362 1.36e-117
ribonucleoprotein complex Hs cellular component 362 1.36e-117

GO (InterProScan)

2 results

GO Term Analysis Type e-value
nucleic acid binding SMART molecular function 7.9E-5
RNA binding Gene3D molecular function 5.1E-26

Back to Top