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GENE CARD

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Gene Card

Best human hits

LOXL2; LOXL3; LOXL4

Species

M.occidentalis

Unique Gene ID

Moocci.g00023904

Gene Model ID

Moocci.CG.ELv1_2.S590750.g23904

Location

S590750:36020..41226

Transcript Models and Sequences

  Moocci.CG.ELv1_2.S590750.g23904.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

9 results

IPR Term Analysis Definition
SRCR ProSiteProfiles SRCR domain
SRCR Pfam SRCR domain
SRCR-like_dom_sf Gene3D SRCR-like domain superfamily
SRCR-like_dom_sf SUPERFAMILY SRCR-like domain superfamily
Lysyl_oxidase PRINTS Lysyl oxidase
Lysyl_oxidase Pfam Lysyl oxidase
SRCR PRINTS SRCR domain
SRCR-like_dom SMART SRCR-like domain
SRCR ProSitePatterns SRCR domain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

52 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
negative regulation of transcription from RNA polymerase II promoter Hs biological process
chromatin Hs cellular component
response to hypoxia Hs biological process
epithelial to mesenchymal transition Hs biological process
endothelial cell proliferation Hs biological process
fibronectin binding Hs molecular function
sprouting angiogenesis Hs biological process
protein-lysine 6-oxidase activity Hs molecular function
scavenger receptor activity Hs molecular function
copper ion binding Hs molecular function
protein binding Hs molecular function
extracellular region Hs cellular component
proteinaceous extracellular matrix Hs cellular component
basement membrane Hs cellular component
extracellular space Hs cellular component
nucleus Hs cellular component
nucleoplasm Hs cellular component
chromosome Hs cellular component
cytoplasm Hs cellular component
endoplasmic reticulum Hs cellular component
chromatin organization Hs biological process
transcription, DNA-templated Hs biological process
regulation of transcription, DNA-templated Hs biological process
cellular protein modification process Hs biological process
receptor-mediated endocytosis Hs biological process
inflammatory response Hs biological process
cell adhesion Hs biological process
aging Hs biological process
electron carrier activity Hs molecular function
positive regulation of epithelial to mesenchymal transition Hs biological process
membrane Hs cellular component
oxidoreductase activity Hs molecular function
oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor Hs molecular function
spinal cord development Hs biological process
electron transport chain Hs biological process
collagen fibril organization Hs biological process
lung development Hs biological process
extracellular matrix Hs cellular component
positive regulation of chondrocyte differentiation Hs biological process
receptor complex Hs cellular component
endothelial cell migration Hs biological process
negative regulation of transcription, DNA-templated Hs biological process
response to copper ion Hs biological process
metal ion binding Hs molecular function
oxidation-reduction process Hs biological process
palate development Hs biological process
somite development Hs biological process
extracellular exosome Hs cellular component
oligosaccharide binding Hs molecular function
heterochromatin organization Hs biological process
negative regulation of stem cell population maintenance Hs biological process
positive regulation of integrin-mediated signaling pathway Hs biological process

GO (Blast)

24 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
chromatin Hs cellular component 376 9.13e-124
fibronectin binding Hs molecular function 392 1.52e-130
protein-lysine 6-oxidase activity Hs molecular function 392 1.52e-130
scavenger receptor activity Hs molecular function 392 1.52e-130
copper ion binding Hs molecular function 392 1.52e-130
protein binding Hs molecular function 392 1.52e-130
extracellular region Hs cellular component 392 1.52e-130
proteinaceous extracellular matrix Hs cellular component 376 9.13e-124
basement membrane Hs cellular component 376 9.13e-124
extracellular space Hs cellular component 392 1.52e-130
nucleus Hs cellular component 392 1.52e-130
nucleoplasm Hs cellular component 376 9.13e-124
chromosome Hs cellular component 376 9.13e-124
cytoplasm Hs cellular component 392 1.52e-130
endoplasmic reticulum Hs cellular component 376 9.13e-124
electron carrier activity Hs molecular function 376 9.13e-124
membrane Hs cellular component 392 1.52e-130
oxidoreductase activity Hs molecular function 392 1.52e-130
oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor Hs molecular function 392 1.52e-130
extracellular matrix Hs cellular component 376 9.13e-124
receptor complex Hs cellular component 383 6.96e-127
metal ion binding Hs molecular function 392 1.52e-130
extracellular exosome Hs cellular component 383 6.96e-127
oligosaccharide binding Hs molecular function 376 9.13e-124

GO (InterProScan)

5 results

GO Term Analysis Type e-value
scavenger receptor activity Pfam molecular function 4.9E-22
copper ion binding Pfam molecular function 6.5E-91
membrane SMART cellular component 2.3E-36
oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor Pfam molecular function 6.5E-91
oxidation-reduction process Pfam biological process 6.5E-91

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