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GENE CARD

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Gene Card

Best human hits

PSMC1; PSMC4

Species

M.occidentalis

Unique Gene ID

Moocci.g00027459

Gene Model ID

Moocci.CG.ELv1_2.S631405.g27459

Location

S631405:74793..79359

Transcript Models and Sequences

  Moocci.CG.ELv1_2.S631405.g27459.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
ATPase_AAA_CS ProSitePatterns ATPase, AAA-type, conserved site
26S_Psome_P45-like TIGRFAM 26S proteasome regulatory subunit P45-like
AAA+_ATPase SMART AAA+ ATPase domain
26S_subunit_4 PANTHER 26S Proteasome regulatory subunit 4
P-loop_NTPase SUPERFAMILY P-loop containing nucleoside triphosphate hydrolase
ATPase_AAA_core Pfam ATPase, AAA-type, core

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

45 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
MAPK cascade Hs biological process
nucleotide binding Hs molecular function
protein polyubiquitination Hs biological process
proteasome complex Hs cellular component
RNA binding Hs molecular function
protein binding Hs molecular function
ATP binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
cytoplasm Hs cellular component
cytosol Hs cellular component
proteasome regulatory particle Hs cellular component
protein folding Hs biological process
proteasome regulatory particle, base subcomplex Hs cellular component
negative regulation of G2/M transition of mitotic cell cycle Hs biological process
membrane Hs cellular component
protein deubiquitination Hs biological process
hydrolase activity Hs molecular function
ATPase activity Hs molecular function
TBP-class protein binding Hs molecular function
proteasome accessory complex Hs cellular component
protein catabolic process Hs biological process
ubiquitin-dependent ERAD pathway Hs biological process
anaphase-promoting complex-dependent catabolic process Hs biological process
SCF-dependent proteasomal ubiquitin-dependent protein catabolic process Hs biological process
nuclear proteasome complex Hs cellular component
cytosolic proteasome complex Hs cellular component
tumor necrosis factor-mediated signaling pathway Hs biological process
proteasome-activating ATPase activity Hs molecular function
NIK/NF-kappaB signaling Hs biological process
Fc-epsilon receptor signaling pathway Hs biological process
proteasome-mediated ubiquitin-dependent protein catabolic process Hs biological process
regulation of mRNA stability Hs biological process
post-translational protein modification Hs biological process
positive regulation of RNA polymerase II transcriptional preinitiation complex assembly Hs biological process
T cell receptor signaling pathway Hs biological process
negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle Hs biological process
transmembrane transport Hs biological process
Wnt signaling pathway, planar cell polarity pathway Hs biological process
interleukin-1-mediated signaling pathway Hs biological process
negative regulation of canonical Wnt signaling pathway Hs biological process
positive regulation of canonical Wnt signaling pathway Hs biological process
negative regulation of neuron death Hs biological process
positive regulation of proteasomal protein catabolic process Hs biological process
regulation of hematopoietic stem cell differentiation Hs biological process

GO (Blast)

21 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
nucleotide binding Hs molecular function 746 0.0
proteasome complex Hs cellular component 746 0.0
RNA binding Hs molecular function 746 0.0
protein binding Hs molecular function 746 0.0
ATP binding Hs molecular function 746 0.0
nucleus Hs cellular component 746 0.0
nucleoplasm Hs cellular component 746 0.0
cytoplasm Hs cellular component 746 0.0
cytosol Hs cellular component 746 0.0
proteasome regulatory particle Hs cellular component 746 0.0
proteasome regulatory particle, base subcomplex Hs cellular component 746 0.0
membrane Hs cellular component 746 0.0
inclusion body Hs cellular component 395 3.34e-135
hydrolase activity Hs molecular function 746 0.0
ATPase activity Hs molecular function 746 0.0
TBP-class protein binding Hs molecular function 746 0.0
proteasome accessory complex Hs cellular component 746 0.0
nuclear proteasome complex Hs cellular component 746 0.0
cytosolic proteasome complex Hs cellular component 746 0.0
proteasome-activating ATPase activity Hs molecular function 746 0.0
synapse Hs cellular component 395 3.34e-135

GO (InterProScan)

5 results

GO Term Analysis Type e-value
ATP binding Pfam molecular function 2.6E-41
cytoplasm TIGRFAM cellular component 5.0E-137
hydrolase activity TIGRFAM molecular function 5.0E-137
protein catabolic process TIGRFAM biological process 5.0E-137
proteasome-activating ATPase activity PANTHER molecular function 5.3E-254

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