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GENE CARD

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Gene Card

Best human hits

DHX16; DHX8

Species

M.oculata

Unique Gene ID

Moocul.g00015358

Gene Model ID

Moocul.CG.ELv1_2.S130952.g15358

Location

S130952:59497..73065

Transcript Models and Sequences

  Moocul.CG.ELv1_2.S130952.g15358.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

10 results

IPR Term Analysis Definition
Helicase_C Pfam Helicase, C-terminal
DNA/RNA_helicase_DEAH_CS ProSitePatterns DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site
Helicase_ATP-bd ProSiteProfiles Helicase superfamily 1/2, ATP-binding domain
Helicase_C CDD Helicase, C-terminal
Helicase_C ProSiteProfiles Helicase, C-terminal
P-loop_NTPase SUPERFAMILY P-loop containing nucleoside triphosphate hydrolase
Helicase-assoc_dom SMART Helicase-associated domain
DUF1605 Pfam Domain of unknown function DUF1605
Helicase-assoc_dom Pfam Helicase-associated domain
Helicase_C SMART Helicase, C-terminal

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

20 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
nucleotide binding Hs molecular function
mRNA splicing, via spliceosome Hs biological process
nucleic acid binding Hs molecular function
RNA binding Hs molecular function
ATP-dependent RNA helicase activity Hs molecular function
helicase activity Hs molecular function
protein binding Hs molecular function
ATP binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
spliceosomal complex Hs cellular component
cytoplasm Hs cellular component
RNA processing Hs biological process
mRNA processing Hs biological process
RNA splicing Hs biological process
nuclear body Hs cellular component
hydrolase activity Hs molecular function
identical protein binding Hs molecular function
U2-type catalytic step 2 spliceosome Hs cellular component
catalytic step 2 spliceosome Hs cellular component

GO (Blast)

18 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleotide binding Hs molecular function 988 0.0
nucleic acid binding Hs molecular function 988 0.0
RNA binding Hs molecular function 988 0.0
RNA helicase activity Hs molecular function 637 0.0
ATP-dependent RNA helicase activity Hs molecular function 988 0.0
helicase activity Hs molecular function 988 0.0
protein binding Hs molecular function 988 0.0
ATP binding Hs molecular function 988 0.0
nucleus Hs cellular component 988 0.0
nucleoplasm Hs cellular component 988 0.0
spliceosomal complex Hs cellular component 988 0.0
cytoplasm Hs cellular component 988 0.0
nuclear body Hs cellular component 988 0.0
hydrolase activity Hs molecular function 988 0.0
ATPase activity Hs molecular function 637 0.0
identical protein binding Hs molecular function 988 0.0
U2-type catalytic step 2 spliceosome Hs cellular component 988 0.0
catalytic step 2 spliceosome Hs cellular component 988 0.0

GO (InterProScan)

1 result

GO Term Analysis Type e-value
helicase activity SMART molecular function 4.0E-39