Login
Help

GENE CARD

Submit your Data

  1. Gene 'Boschl.CG.Botznik201...' > 
  2. > 
  3. > 

Gene Card

Best human hits

PAPD4; ZCCHC11; ZCCHC6

Species

P.fumigata

Unique Gene ID

Phfumi.g00001011

Gene Model ID

Phfumi.CG.MTP2014.S109.g01011

Location

S109:54492..56199

Transcript Models and Sequences

  Phfumi.CG.MTP2014.S109.g01011.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree
 Click here to see the tree inference method

Gene Annotations

InterPro

1 result

IPR Term Analysis Definition
PAP_assoc Pfam PAP/25A-associated

GOSlim

24 results

GO Term Annotation Origin Type
nucleotide binding Orthology molecular function
nucleic acid binding Blast molecular function
RNA binding Blast molecular function
protein binding Orthology molecular function
ATP binding Orthology molecular function
extracellular space Blast cellular component
nucleus Orthology cellular component
nucleoplasm Blast cellular component
nucleolus Blast cellular component
cytoplasm Orthology cellular component
cytosol Orthology cellular component
mRNA processing Orthology biological process
zinc ion binding Blast molecular function
transferase activity Orthology molecular function
neuron differentiation Orthology biological process
metal ion binding Orthology molecular function
extracellular exosome Blast cellular component
animal organ development Orthology biological process
immune system process Orthology biological process
cell differentiation Orthology biological process
transferase activity, transferring phosphorus-containing groups Orthology molecular function
nuclear part Orthology cellular component
macromolecular complex Orthology cellular component
RNA metabolic process Orthology biological process

GO (Orthology)

15 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
nucleotide binding Hs molecular function
hematopoietic progenitor cell differentiation Hs biological process
polynucleotide adenylyltransferase activity Hs molecular function
protein binding Hs molecular function
ATP binding Hs molecular function
nucleus Hs cellular component
cytoplasm Hs cellular component
cytosol Hs cellular component
mRNA processing Hs biological process
transferase activity Hs molecular function
neuron differentiation Hs biological process
nuclear RNA-directed RNA polymerase complex Hs cellular component
RNA polyadenylation Hs biological process
metal ion binding Hs molecular function
retina development in camera-type eye Hs biological process

GO (Blast)

19 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
nucleotide binding Hs molecular function 175 7.93e-52
nucleic acid binding Hs molecular function 106 4.04e-26
RNA binding Hs molecular function 106 4.04e-26
polynucleotide adenylyltransferase activity Hs molecular function 175 7.93e-52
protein binding Hs molecular function 175 7.93e-52
ATP binding Hs molecular function 175 7.93e-52
extracellular space Hs cellular component 103 4.18e-25
nucleus Hs cellular component 175 7.93e-52
nucleoplasm Hs cellular component 106 4.04e-26
nucleolus Hs cellular component 103 4.18e-25
cytoplasm Hs cellular component 175 7.93e-52
cytosol Hs cellular component 175 7.93e-52
zinc ion binding Hs molecular function 106 4.04e-26
transferase activity Hs molecular function 175 7.93e-52
nucleotidyltransferase activity Hs molecular function 106 4.04e-26
nuclear RNA-directed RNA polymerase complex Hs cellular component 175 7.93e-52
metal ion binding Hs molecular function 175 7.93e-52
RNA uridylyltransferase activity Hs molecular function 106 4.04e-26
extracellular exosome Hs cellular component 103 4.18e-25

GO (InterProScan)

No result

GO Term Analysis Type e-value

Back to Top