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Gene Card

Best human hits

TUBB; TUBB2B; TUBB4B

Species

P.fumigata

Unique Gene ID

Phfumi.g00006722

Gene Model ID

Phfumi.CG.MTP2014.S5080.g06722

Location

S5080:6461..11663

Transcript Models and Sequences

  Phfumi.CG.MTP2014.S5080.g06722.01.t
Phfumi.CG.MTP2014.S5080.g06722.02.t

External Database Gene Card

External database links

No result

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WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

15 results

IPR Term Analysis Definition
Tubulin PRINTS Tubulin
Tubulin_CS ProSitePatterns Tubulin, conserved site
Beta_tubulin PANTHER Beta tubulin
Beta-tubulin_BS ProSitePatterns Beta tubulin, autoregulation binding site
Tubulin/FtsZ_2-layer-sand-dom SMART Tubulin/FtsZ, 2-layer sandwich domain
Tubulin/FtsZ_C_sf Gene3D Tubulin/FtsZ, C-terminal domain superfamily
Beta_tubulin PRINTS Beta tubulin
Tubulin_C Gene3D Tubulin, C-terminal
Tubulin_FtsZ_GTPase SMART Tubulin/FtsZ, GTPase domain
Tubulin/FtsZ_GTPase_sf SUPERFAMILY Tubulin/FtsZ, GTPase domain superfamily
Tubulin/FtsZ_2-layer-sand-dom Pfam Tubulin/FtsZ, 2-layer sandwich domain
Tubulin_FtsZ_GTPase Pfam Tubulin/FtsZ, GTPase domain
Tubulin/FtsZ_GTPase_sf Gene3D Tubulin/FtsZ, GTPase domain superfamily
Tub_FtsZ_C SUPERFAMILY Tubulin/FtsZ, C-terminal
Tubulin PANTHER Tubulin

GOSlim

52 results

GO Term Annotation Origin Type
G2/M transition of mitotic cell cycle Orthology biological process
nucleotide binding Orthology molecular function
GTPase activity Orthology molecular function
structural molecule activity Orthology molecular function
protein binding Orthology molecular function
GTP binding Orthology molecular function
extracellular region Orthology cellular component
nucleus Orthology cellular component
cytoplasm Orthology cellular component
cytosol Orthology cellular component
cytoskeleton Orthology cellular component
microtubule Orthology cellular component
microtubule-based process Orthology biological process
nervous system development Orthology biological process
cellular process Orthology biological process
microtubule cytoskeleton Orthology cellular component
ubiquitin protein ligase binding Orthology molecular function
myelin sheath Orthology cellular component
cell body Orthology cellular component
protein heterodimerization activity Orthology molecular function
unfolded protein binding Orthology molecular function
cell division Orthology biological process
extracellular exosome Orthology cellular component
extracellular vesicle Orthology cellular component
calcium ion binding Orthology molecular function
cell projection Orthology cellular component
neuronal cell body Orthology cellular component
membrane raft Orthology cellular component
cell migration Orthology biological process
generation of neurons Orthology biological process
RNA binding Orthology molecular function
organelle organization Orthology biological process
nuclear envelope Orthology cellular component
intracellular organelle lumen Orthology cellular component
intracellular transport Orthology biological process
cytoplasmic vesicle Orthology cellular component
lysosome Orthology cellular component
vacuolar part Orthology cellular component
endomembrane system Orthology cellular component
cytoplasmic part Orthology cellular component
intracellular non-membrane-bounded organelle Orthology cellular component
macromolecular complex Orthology cellular component
receptor binding Orthology molecular function
localization Orthology biological process
axon guidance Orthology biological process
cell development Orthology biological process
gamete generation Orthology biological process
cytoskeletal part Orthology cellular component
organelle Orthology cellular component
plasma membrane region Orthology cellular component
cell projection part Orthology cellular component
axon Orthology cellular component

GO (Orthology)

49 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
G2/M transition of mitotic cell cycle Hs biological process
nucleotide binding Hs molecular function
neuron migration Hs biological process
double-stranded RNA binding Hs molecular function
GTPase activity Hs molecular function
structural molecule activity Hs molecular function
structural constituent of cytoskeleton Hs molecular function
protein binding Hs molecular function
GTP binding Hs molecular function
extracellular region Hs cellular component
nucleus Hs cellular component
nuclear envelope lumen Hs cellular component
cytoplasm Hs cellular component
cytosol Hs cellular component
cytoskeleton Hs cellular component
microtubule Hs cellular component
cytoskeleton organization Hs biological process
microtubule-based process Hs biological process
nervous system development Hs biological process
cellular process Hs biological process
regulation of G2/M transition of mitotic cell cycle Hs biological process
microtubule cytoskeleton Hs cellular component
cytoskeleton-dependent intracellular transport Hs biological process
ubiquitin protein ligase binding Hs molecular function
azurophil granule lumen Hs cellular component
cytoplasmic ribonucleoprotein granule Hs cellular component
MHC class I protein binding Hs molecular function
myelin sheath Hs cellular component
cell body Hs cellular component
protein heterodimerization activity Hs molecular function
unfolded protein binding Hs molecular function
cell division Hs biological process
extracellular exosome Hs cellular component
positive regulation of axon guidance Hs biological process
extracellular vesicle Hs cellular component
oocyte maturation Hs biological process
calcium ion binding Hs molecular function
spindle Hs cellular component
cilium Hs cellular component
axoneme Hs cellular component
protein domain specific binding Hs molecular function
negative regulation of microtubule polymerization Hs biological process
GTPase activating protein binding Hs molecular function
internode region of axon Hs cellular component
cell projection Hs cellular component
neuronal cell body Hs cellular component
membrane raft Hs cellular component
spindle assembly Hs biological process
meiotic spindle Hs cellular component

GO (Blast)

25 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
nucleotide binding Hs molecular function 927 0.0
double-stranded RNA binding Hs molecular function 927 0.0
GTPase activity Hs molecular function 927 0.0
structural molecule activity Hs molecular function 912 0.0
structural constituent of cytoskeleton Hs molecular function 927 0.0
protein binding Hs molecular function 914 0.0
GTP binding Hs molecular function 927 0.0
extracellular region Hs cellular component 927 0.0
nucleus Hs cellular component 927 0.0
nuclear envelope lumen Hs cellular component 912 0.0
cytoplasm Hs cellular component 927 0.0
cytosol Hs cellular component 927 0.0
cytoskeleton Hs cellular component 927 0.0
microtubule Hs cellular component 927 0.0
microtubule cytoskeleton Hs cellular component 914 0.0
ubiquitin protein ligase binding Hs molecular function 912 0.0
azurophil granule lumen Hs cellular component 927 0.0
cytoplasmic ribonucleoprotein granule Hs cellular component 912 0.0
MHC class I protein binding Hs molecular function 927 0.0
myelin sheath Hs cellular component 927 0.0
cell body Hs cellular component 912 0.0
protein heterodimerization activity Hs molecular function 914 0.0
unfolded protein binding Hs molecular function 927 0.0
extracellular exosome Hs cellular component 927 0.0
extracellular vesicle Hs cellular component 927 0.0

GO (InterProScan)

5 results

GO Term Analysis Type e-value
GTPase activity SMART molecular function 2.1E-69
structural constituent of cytoskeleton PANTHER molecular function 0.0
GTP binding PANTHER molecular function 0.0
microtubule PANTHER cellular component 0.0
microtubule-based process PANTHER biological process 0.0

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