Aniseed - Gene card

Gene Card

Best human hits

HOXA1

Species

P.fumigata

Unique Gene ID

Phfumi.g00007403

Gene Model ID

Phfumi.CG.MTP2014.S6543.g07403

Location

S6543:3598..4285

Transcript Models and Sequences

Phfumi.CG.MTP2014.S6543.g07403.01.t
Phfumi.CG.MTP2014.S6543.g07403.02.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.

Click here to see how you can interact with this tree
Click here to see the tree inference method

Gene Annotations

InterPro

No result

IPR Term	Analysis	Definition

GOSlim

19 results

GO Term	Annotation Origin	Type
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Orthology	molecular function
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	Orthology	molecular function
DNA binding	Orthology	molecular function
protein binding	Orthology	molecular function
nucleus	Orthology	cellular component
transcription, DNA-templated	Orthology	biological process
regulation of transcription, DNA-templated	Orthology	biological process
transcription from RNA polymerase II promoter	Orthology	biological process
multicellular organism development	Orthology	biological process
sensory perception of sound	Orthology	biological process
anatomical structure morphogenesis	Orthology	biological process
identical protein binding	Orthology	molecular function
sequence-specific DNA binding	Orthology	molecular function
positive regulation of transcription from RNA polymerase II promoter	Orthology	biological process
animal organ development	Orthology	biological process
blood vessel morphogenesis	Orthology	biological process
nervous system process	Orthology	biological process
blood vessel development	Orthology	biological process
anatomical structure formation involved in morphogenesis	Orthology	biological process

GO (Orthology)

23 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	Hs	molecular function
DNA binding	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
transcription, DNA-templated	Hs	biological process
regulation of transcription, DNA-templated	Hs	biological process
transcription from RNA polymerase II promoter	Hs	biological process
multicellular organism development	Hs	biological process
sensory perception of sound	Hs	biological process
optokinetic behavior	Hs	biological process
anatomical structure morphogenesis	Hs	biological process
identical protein binding	Hs	molecular function
sequence-specific DNA binding	Hs	molecular function
positive regulation of transcription from RNA polymerase II promoter	Hs	biological process
embryonic neurocranium morphogenesis	Hs	biological process
inner ear development	Hs	biological process
artery morphogenesis	Hs	biological process
regulation of behavior	Hs	biological process
cognition	Hs	biological process
neuromuscular process	Hs	biological process
artery development	Hs	biological process
semicircular canal formation	Hs	biological process

GO (Blast)

7 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function	37.4	0.004
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	Hs	molecular function	37.4	0.004
DNA binding	Hs	molecular function	37.4	0.004
protein binding	Hs	molecular function	37.4	0.004
nucleus	Hs	cellular component	37.4	0.004
identical protein binding	Hs	molecular function	37.4	0.004
sequence-specific DNA binding	Hs	molecular function	37.4	0.004

GO (InterProScan)

No result

GO Term	Analysis	Type	e-value