Gene Card
Best human hits
RPS13
Species
Unique Gene ID
Phmamm.g00014032
Gene Model ID
Phmamm.CG.MTP2014.S1192.g14032
Location
S1192:22766..24902
Transcript Models and Sequences
Phmamm.CG.MTP2014.S1192.g14032.01.t
Phmamm.CG.MTP2014.S1192.g14032.02.t
Phmamm.CG.MTP2014.S1192.g14032.03.t
Phmamm.CG.MTP2014.S1192.g14032.04.t
n/a
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You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
9 results
| IPR Term | Analysis | Definition |
|---|---|---|
| Ribosomal_S15 | CDD | Ribosomal protein S15 |
| Ribosomal_S13/S15_N | Pfam | Ribosomal protein S13/S15, N-terminal |
| Ribosomal_S15 | SMART | Ribosomal protein S15 |
| Ribosomal_S15 | ProSitePatterns | Ribosomal protein S15 |
| Ribosomal_S15P | PANTHER | Ribosomal protein S15P |
| S15_NS1_RNA-bd | SUPERFAMILY | S15/NS1, RNA-binding |
| Ribosomal_S15 | Pfam | Ribosomal protein S15 |
| Ribosomal_S15P | Hamap | Ribosomal protein S15P |
| Ribosomal_S13/S15_N | SMART | Ribosomal protein S13/S15, N-terminal |
GOSlim
19 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | Orthology | biological process |
| RNA binding | Orthology | molecular function |
| structural constituent of ribosome | Orthology | molecular function |
| protein binding | Orthology | molecular function |
| intracellular | Orthology | cellular component |
| nucleus | Orthology | cellular component |
| nucleoplasm | Orthology | cellular component |
| nucleolus | Orthology | cellular component |
| cytosol | Orthology | cellular component |
| ribosome | Orthology | cellular component |
| focal adhesion | Orthology | cellular component |
| translational initiation | Orthology | biological process |
| SRP-dependent cotranslational protein targeting to membrane | Orthology | biological process |
| membrane | Orthology | cellular component |
| extracellular exosome | Orthology | cellular component |
| RNA processing | Orthology | biological process |
| intracellular organelle part | Orthology | cellular component |
| RNA splicing | Orthology | biological process |
| negative regulation of gene expression | Orthology | biological process |
GO (Orthology)
23 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|---|---|
| nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | Hs | biological process |
| RNA binding | Hs | molecular function |
| mRNA binding | Hs | molecular function |
| structural constituent of ribosome | Hs | molecular function |
| protein binding | Hs | molecular function |
| intracellular | Hs | cellular component |
| nucleus | Hs | cellular component |
| nucleoplasm | Hs | cellular component |
| nucleolus | Hs | cellular component |
| cytosol | Hs | cellular component |
| ribosome | Hs | cellular component |
| focal adhesion | Hs | cellular component |
| rRNA processing | Hs | biological process |
| translation | Hs | biological process |
| translational initiation | Hs | biological process |
| SRP-dependent cotranslational protein targeting to membrane | Hs | biological process |
| membrane | Hs | cellular component |
| cytosolic small ribosomal subunit | Hs | cellular component |
| intracellular ribonucleoprotein complex | Hs | cellular component |
| negative regulation of RNA splicing | Hs | biological process |
| mRNA 5'-UTR binding | Hs | molecular function |
| extracellular exosome | Hs | cellular component |
| small ribosomal subunit rRNA binding | Hs | molecular function |
GO (Blast)
17 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| RNA binding | Hs | molecular function | 272 | 1.97e-95 |
| mRNA binding | Hs | molecular function | 272 | 1.97e-95 |
| structural constituent of ribosome | Hs | molecular function | 272 | 1.97e-95 |
| protein binding | Hs | molecular function | 272 | 1.97e-95 |
| intracellular | Hs | cellular component | 272 | 1.97e-95 |
| nucleus | Hs | cellular component | 272 | 1.97e-95 |
| nucleoplasm | Hs | cellular component | 272 | 1.97e-95 |
| nucleolus | Hs | cellular component | 272 | 1.97e-95 |
| cytosol | Hs | cellular component | 272 | 1.97e-95 |
| ribosome | Hs | cellular component | 272 | 1.97e-95 |
| focal adhesion | Hs | cellular component | 272 | 1.97e-95 |
| membrane | Hs | cellular component | 272 | 1.97e-95 |
| cytosolic small ribosomal subunit | Hs | cellular component | 272 | 1.97e-95 |
| intracellular ribonucleoprotein complex | Hs | cellular component | 272 | 1.97e-95 |
| mRNA 5'-UTR binding | Hs | molecular function | 272 | 1.97e-95 |
| extracellular exosome | Hs | cellular component | 272 | 1.97e-95 |
| small ribosomal subunit rRNA binding | Hs | molecular function | 272 | 1.97e-95 |
GO (InterProScan)
4 results
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| structural constituent of ribosome | SMART | molecular function | 1.5E-37 |
| intracellular | CDD | cellular component | 1.76647E-25 |
| ribosome | SMART | cellular component | 1.5E-37 |
| translation | SMART | biological process | 1.5E-37 |
