Gene Card
Best human hits
HOXA1; HOXB1; HOXD1
Species
Unique Gene ID
Phmamm.g00014047
Gene Model ID
Phmamm.CG.MTP2014.S1196.g14047
Location
S1196:1182..10145
Transcript Models and Sequences
Genoscope Yasuo Villefranche
1 result
AHC0AAA18YA13
Plate: Plate_18_A13
n/a
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The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
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You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
5 results
| IPR Term | Analysis | Definition |
|---|---|---|
| Homeobox_dom | ProSiteProfiles | Homeobox domain |
| Homeobox-like_sf | SUPERFAMILY | Homeobox-like domain superfamily |
| Homeobox_dom | CDD | Homeobox domain |
| Homeobox_dom | Pfam | Homeobox domain |
| Homeobox_dom | SMART | Homeobox domain |
GOSlim
10 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| RNA polymerase II regulatory region sequence-specific DNA binding | Blast | molecular function |
| RNA polymerase II core promoter proximal region sequence-specific DNA binding | Blast | molecular function |
| RNA polymerase II transcription factor activity, sequence-specific DNA binding | Blast | molecular function |
| transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding | Blast | molecular function |
| DNA binding | Blast | molecular function |
| protein binding | Blast | molecular function |
| nucleus | Blast | cellular component |
| nucleoplasm | Blast | cellular component |
| identical protein binding | Blast | molecular function |
| sequence-specific DNA binding | Blast | molecular function |
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|
GO (Blast)
12 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| RNA polymerase II regulatory region sequence-specific DNA binding | Hs | molecular function | 108 | 1.03e-27 |
| RNA polymerase II core promoter proximal region sequence-specific DNA binding | Hs | molecular function | 108 | 1.03e-27 |
| RNA polymerase II transcription factor activity, sequence-specific DNA binding | Hs | molecular function | 110 | 4.40e-28 |
| transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding | Hs | molecular function | 108 | 1.03e-27 |
| transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding | Hs | molecular function | 110 | 4.40e-28 |
| DNA binding | Hs | molecular function | 110 | 4.40e-28 |
| protein binding | Hs | molecular function | 110 | 4.40e-28 |
| nucleus | Hs | cellular component | 110 | 4.40e-28 |
| nucleoplasm | Hs | cellular component | 98.6 | 7.30e-24 |
| protein domain specific binding | Hs | molecular function | 108 | 1.03e-27 |
| identical protein binding | Hs | molecular function | 110 | 4.40e-28 |
| sequence-specific DNA binding | Hs | molecular function | 110 | 4.40e-28 |
GO (InterProScan)
1 result
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| DNA binding | CDD | molecular function | 1.70823E-13 |
