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GENE CARD

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Gene Card

Best human hits

TPM2; TPM3; TPM4

Species

P.mammillata

Unique Gene ID

Phmamm.g00004430

Gene Model ID

Phmamm.CG.MTP2014.S159.g04430

Location

S159:21240..22074

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S159.g04430.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

31 results

AHC0AAA19YB14

Plate: Plate_19_B14

AHC0AAA28YH19

Plate: Plate_28_H19

AHC0AAA28YP17

Plate: Plate_28_P17

AHC0AAA48YC06

Plate: Plate_48_C06

AHC0AAA59YP19

Plate: Plate_59_P19

AHC0AAA66YD03

Plate: Plate_66_D03

AHC0AAA69YF07

Plate: Plate_69_F07

AHC0AAA108YE13

Plate: Plate_108_E13

AHC0AAA118YF16

Plate: Plate_118_F16

AHC0AAA133YG19

Plate: Plate_133_G19

AHC0AAA134YL18

Plate: Plate_134_L18

AHC0AAA152YA24

Plate: Plate_152_A24

AHC0AAA86YP09

Plate: Plate_86_P09

AHC0AAA87YK19

Plate: Plate_87_K19

AHC0AAA91YK19

Plate: Plate_91_K19

AHC0AAA93YN21

Plate: Plate_93_N21

AHC0AAA133YG17

Plate: Plate_133_G17

AHC0AAA169YI14

Plate: Plate_169_I14

AHC0AAA176YB23

Plate: Plate_176_B23

AHC0AAA176YC09

Plate: Plate_176_C09

AHC0AAA176YJ24

Plate: Plate_176_J24

AHC0AAA201YI17

Plate: Plate_201_I17

AHC0AAA209YN21

Plate: Plate_209_N21

AHC0AAA231YF01

Plate: Plate_231_F01

AHC0AAA237YK20

Plate: Plate_237_K20

AHC0AAA241YA18

Plate: Plate_241_A18

AHC0AAA250YD01

Plate: Plate_250_D01

AHC0AAA251YI18

Plate: Plate_251_I18

AHC0AAA260YE24

Plate: Plate_260_E24

AHC0AAA262YK23

Plate: Plate_262_K23

AHC0AAA264YH17

Plate: Plate_264_H17

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

2 results

IPR Term Analysis Definition
Tropomyosin PRINTS Tropomyosin
Tropomyosin Pfam Tropomyosin

GOSlim

41 results

GO Term Annotation Origin Type
actin binding Orthology molecular function
calcium ion binding Orthology molecular function
protein binding Orthology molecular function
cytoplasm Orthology cellular component
cytosol Orthology cellular component
cytoskeleton Orthology cellular component
focal adhesion Orthology cellular component
membrane Orthology cellular component
identical protein binding Orthology molecular function
protein homodimerization activity Orthology molecular function
metal ion binding Orthology molecular function
protein heterodimerization activity Orthology molecular function
actin filament binding Orthology molecular function
extracellular exosome Orthology cellular component
cytoskeletal protein binding Orthology molecular function
integral component of membrane Orthology cellular component
wound healing Orthology biological process
cell differentiation Orthology biological process
cytoskeletal part Orthology cellular component
macromolecular complex Orthology cellular component
cytoplasmic part Orthology cellular component
organelle organization Orthology biological process
structural molecule activity Orthology molecular function
cell periphery Orthology cellular component
nucleoside-triphosphatase activity Orthology molecular function
cell morphogenesis Orthology biological process
intracellular non-membrane-bounded organelle Orthology cellular component
organelle part Orthology cellular component
cell migration Orthology biological process
cell projection organization Orthology biological process
cell projection Orthology cellular component
plasma membrane region Orthology cellular component
cell projection membrane Orthology cellular component
cell leading edge Orthology cellular component
positive regulation of hydrolase activity Orthology biological process
cellular response to stress Orthology biological process
response to oxidative stress Orthology biological process
cell development Orthology biological process
cell adhesion Orthology biological process
heart development Orthology biological process
anatomical structure morphogenesis Orthology biological process

GO (Orthology)

47 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
osteoblast differentiation Hs biological process
stress fiber Hs cellular component
podosome Hs cellular component
actin binding Hs molecular function
calcium ion binding Hs molecular function
protein binding Hs molecular function
cytoplasm Hs cellular component
cytosol Hs cellular component
cytoskeleton Hs cellular component
muscle thin filament tropomyosin Hs cellular component
actin filament Hs cellular component
focal adhesion Hs cellular component
muscle contraction Hs biological process
actin filament organization Hs biological process
structural constituent of muscle Hs molecular function
actin cytoskeleton Hs cellular component
membrane Hs cellular component
cortical cytoskeleton Hs cellular component
filamentous actin Hs cellular component
identical protein binding Hs molecular function
protein homodimerization activity Hs molecular function
regulation of ATPase activity Hs biological process
metal ion binding Hs molecular function
protein heterodimerization activity Hs molecular function
actin filament binding Hs molecular function
extracellular exosome Hs cellular component
structural constituent of cytoskeleton Hs molecular function
regulation of muscle contraction Hs biological process
cytoskeleton organization Hs biological process
regulation of heart contraction Hs biological process
cytoskeletal protein binding Hs molecular function
regulation of cell shape Hs biological process
integral component of membrane Hs cellular component
myofibril Hs cellular component
sarcomere Hs cellular component
negative regulation of cell migration Hs biological process
ruffle organization Hs biological process
bleb Hs cellular component
ruffle membrane Hs cellular component
positive regulation of ATPase activity Hs biological process
cellular response to reactive oxygen species Hs biological process
wound healing Hs biological process
sarcomere organization Hs biological process
positive regulation of cell adhesion Hs biological process
positive regulation of stress fiber assembly Hs biological process
ventricular cardiac muscle tissue morphogenesis Hs biological process
cardiac muscle contraction Hs biological process

GO (Blast)

22 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
stress fiber Hs cellular component 312 2.08e-107
podosome Hs cellular component 312 2.08e-107
actin binding Hs molecular function 312 2.08e-107
calcium ion binding Hs molecular function 312 2.08e-107
protein binding Hs molecular function 312 2.08e-107
cytoplasm Hs cellular component 312 2.08e-107
cytosol Hs cellular component 312 2.08e-107
cytoskeleton Hs cellular component 312 2.08e-107
muscle thin filament tropomyosin Hs cellular component 312 2.08e-107
actin filament Hs cellular component 312 2.08e-107
focal adhesion Hs cellular component 312 2.08e-107
structural constituent of muscle Hs molecular function 312 2.08e-107
actin cytoskeleton Hs cellular component 310 8.16e-106
membrane Hs cellular component 312 2.08e-107
cortical cytoskeleton Hs cellular component 312 2.08e-107
filamentous actin Hs cellular component 312 2.08e-107
identical protein binding Hs molecular function 312 2.08e-107
protein homodimerization activity Hs molecular function 312 2.08e-107
metal ion binding Hs molecular function 312 2.08e-107
protein heterodimerization activity Hs molecular function 312 2.08e-107
actin filament binding Hs molecular function 312 2.08e-107
extracellular exosome Hs cellular component 312 2.08e-107

GO (InterProScan)

No result

GO Term Analysis Type e-value