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GENE CARD

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Gene Card

Best human hits

AUH; ECHDC2; ECHS1

Species

P.mammillata

Unique Gene ID

Phmamm.g00017746

Gene Model ID

Phmamm.CG.MTP2014.S3436.g17746

Location

S3436:8748..11081

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

15 results

AHC0AAA5YH20

Plate: Plate_5_H20

AHC0AAA34YJ15

Plate: Plate_34_J15

AHC0AAA46YN03

Plate: Plate_46_N03

AHC0AAA55YL07

Plate: Plate_55_L07

AHC0AAA66YF22

Plate: Plate_66_F22

AHC0AAA71YH20

Plate: Plate_71_H20

AHC0AAA106YI11

Plate: Plate_106_I11

AHC0AAA107YF22

Plate: Plate_107_F22

AHC0AAA121YA14

Plate: Plate_121_A14

AHC0AAA152YF05

Plate: Plate_152_F05

AHC0AAA159YK06

Plate: Plate_159_K06

AHC0AAA174YK10

Plate: Plate_174_K10

AHC0AAA190YJ24

Plate: Plate_190_J24

AHC0AAA220YG03

Plate: Plate_220_G03

AHC0AAA55YL05

Plate: Plate_55_L05

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

3 results

IPR Term Analysis Definition
Enoyl-CoA_hydra/iso Pfam Enoyl-CoA hydratase/isomerase
Enoyl-CoA_hyd/isom_CS ProSitePatterns Enoyl-CoA hydratase/isomerase, conserved site
ClpP/crotonase-like_dom_sf SUPERFAMILY ClpP/crotonase-like domain superfamily

GOSlim

7 results

GO Term Annotation Origin Type
RNA binding Blast molecular function
catalytic activity Blast molecular function
protein binding Blast molecular function
mitochondrion Blast cellular component
mitochondrial matrix Blast cellular component
metabolic process InterProScan biological process
extracellular exosome Blast cellular component

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

11 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
RNA binding Hs molecular function 82.8 3.36e-18
mRNA 3'-UTR binding Hs molecular function 82.8 3.36e-18
catalytic activity Hs molecular function 103 7.00e-26
enoyl-CoA hydratase activity Hs molecular function 103 7.00e-26
methylglutaconyl-CoA hydratase activity Hs molecular function 82.8 3.36e-18
protein binding Hs molecular function 103 7.00e-26
mitochondrion Hs cellular component 103 7.00e-26
mitochondrial matrix Hs cellular component 103 7.00e-26
lyase activity Hs molecular function 103 7.00e-26
itaconyl-CoA hydratase activity Hs molecular function 82.8 3.36e-18
extracellular exosome Hs cellular component 103 7.00e-26

GO (InterProScan)

2 results

GO Term Analysis Type e-value
catalytic activity Pfam molecular function 6.0E-40
metabolic process Pfam biological process 6.0E-40