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GENE CARD

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Gene Card

Best human hits

H1F0; HIST1H1E; HIST1H1T

Species

P.mammillata

Unique Gene ID

Phmamm.g00007663

Gene Model ID

Phmamm.CG.MTP2014.S351.g07663

Location

S351:59184..59715

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S351.g07663.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

93 results

AHC0AAA14YO16

Plate: Plate_14_O16

AHC0AAA15YB17

Plate: Plate_15_B17

AHC0AAA22YL19

Plate: Plate_22_L19

AHC0AAA7YC15

Plate: Plate_7_C15

AHC0AAA9YJ08

Plate: Plate_9_J08

AHC0AAA29YC09

Plate: Plate_29_C09

AHC0AAA30YG01

Plate: Plate_30_G01

AHC0AAA31YA10

Plate: Plate_31_A10

AHC0AAA31YP16

Plate: Plate_31_P16

AHC0AAA34YD24

Plate: Plate_34_D24

AHC0AAA37YA13

Plate: Plate_37_A13

AHC0AAA40YD08

Plate: Plate_40_D08

AHC0AAA46YD14

Plate: Plate_46_D14

AHC0AAA48YH19

Plate: Plate_48_H19

AHC0AAA53YA06

Plate: Plate_53_A06

AHC0AAA55YL10

Plate: Plate_55_L10

AHC0AAA59YO16

Plate: Plate_59_O16

AHC0AAA60YG05

Plate: Plate_60_G05

AHC0AAA64YC20

Plate: Plate_64_C20

AHC0AAA64YN23

Plate: Plate_64_N23

AHC0AAA65YC03

Plate: Plate_65_C03

AHC0AAA68YD22

Plate: Plate_68_D22

AHC0AAA74YF16

Plate: Plate_74_F16

AHC0AAA101YG06

Plate: Plate_101_G06

AHC0AAA101YO20

Plate: Plate_101_O20

AHC0AAA102YA10

Plate: Plate_102_A10

AHC0AAA107YC14

Plate: Plate_107_C14

AHC0AAA108YB04

Plate: Plate_108_B04

AHC0AAA109YL12

Plate: Plate_109_L12

AHC0AAA111YF10

Plate: Plate_111_F10

AHC0AAA112YD07

Plate: Plate_112_D07

AHC0AAA112YO18

Plate: Plate_112_O18

AHC0AAA115YL24

Plate: Plate_115_L24

AHC0AAA118YO16

Plate: Plate_118_O16

AHC0AAA122YH19

Plate: Plate_122_H19

AHC0AAA122YN11

Plate: Plate_122_N11

AHC0AAA127YA01

Plate: Plate_127_A01

AHC0AAA127YN23

Plate: Plate_127_N23

AHC0AAA128YJ11

Plate: Plate_128_J11

AHC0AAA133YE20

Plate: Plate_133_E20

AHC0AAA134YP11

Plate: Plate_134_P11

AHC0AAA136YM09

Plate: Plate_136_M09

AHC0AAA141YO06

Plate: Plate_141_O06

AHC0AAA148YF02

Plate: Plate_148_F02

AHC0AAA150YG12

Plate: Plate_150_G12

AHC0AAA152YA21

Plate: Plate_152_A21

AHC0AAA153YJ07

Plate: Plate_153_J07

AHC0AAA86YN22

Plate: Plate_86_N22

AHC0AAA88YF19

Plate: Plate_88_F19

AHC0AAA92YH13

Plate: Plate_92_H13

AHC0AAA92YJ03

Plate: Plate_92_J03

AHC0AAA92YN19

Plate: Plate_92_N19

AHC0AAA94YG08

Plate: Plate_94_G08

AHC0AAA99YM02

Plate: Plate_99_M02

AHC0AAA133YE18

Plate: Plate_133_E18

AHC0AAA158YE01

Plate: Plate_158_E01

AHC0AAA159YC04

Plate: Plate_159_C04

AHC0AAA159YI04

Plate: Plate_159_I04

AHC0AAA160YN03

Plate: Plate_160_N03

AHC0AAA162YA23

Plate: Plate_162_A23

AHC0AAA162YK10

Plate: Plate_162_K10

AHC0AAA174YJ16

Plate: Plate_174_J16

AHC0AAA175YE05

Plate: Plate_175_E05

AHC0AAA180YJ04

Plate: Plate_180_J04

AHC0AAA181YC07

Plate: Plate_181_C07

AHC0AAA181YK16

Plate: Plate_181_K16

AHC0AAA184YA09

Plate: Plate_184_A09

AHC0AAA188YC07

Plate: Plate_188_C07

AHC0AAA189YM04

Plate: Plate_189_M04

AHC0AAA193YP14

Plate: Plate_193_P14

AHC0AAA195YG12

Plate: Plate_195_G12

AHC0AAA196YB09

Plate: Plate_196_B09

AHC0AAA198YM13

Plate: Plate_198_M13

AHC0AAA209YO21

Plate: Plate_209_O21

AHC0AAA211YP21

Plate: Plate_211_P21

AHC0AAA212YN22

Plate: Plate_212_N22

AHC0AAA217YN21

Plate: Plate_217_N21

AHC0AAA217YP04

Plate: Plate_217_P04

AHC0AAA218YC06

Plate: Plate_218_C06

AHC0AAA224YF18

Plate: Plate_224_F18

AHC0AAA231YE01

Plate: Plate_231_E01

AHC0AAA232YE11

Plate: Plate_232_E11

AHC0AAA235YE23

Plate: Plate_235_E23

AHC0AAA235YO09

Plate: Plate_235_O09

AHC0AAA236YC06

Plate: Plate_236_C06

AHC0AAA242YC16

Plate: Plate_242_C16

AHC0AAA254YM20

Plate: Plate_254_M20

AHC0AAA261YJ16

Plate: Plate_261_J16

AHC0AAA269YP15

Plate: Plate_269_P15

AHC0AAA55YN12

Plate: Plate_55_N12

AHC0AAA92YJ01

Plate: Plate_92_J01

AHC0AAA92YJ15

Plate: Plate_92_J15

AHC0AAA92YN17

Plate: Plate_92_N17

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

7 results

IPR Term Analysis Definition
Histone_H1/H5_H15 ProSiteProfiles Linker histone H1/H5, domain H15
Histone_H1/H5_H15 Pfam Linker histone H1/H5, domain H15
WH-like_DNA-bd_sf Gene3D Winged helix-like DNA-binding domain superfamily
Histone_H5 PRINTS Histone H5
WH_DNA-bd_sf SUPERFAMILY Winged helix DNA-binding domain superfamily
Histone_H1/H5_H15 CDD Linker histone H1/H5, domain H15
Histone_H1/H5_H15 SMART Linker histone H1/H5, domain H15

GOSlim

26 results

GO Term Annotation Origin Type
nucleotide binding Blast molecular function
DNA binding Blast molecular function
double-stranded DNA binding Blast molecular function
RNA binding Blast molecular function
calcium ion binding Blast molecular function
protein binding Blast molecular function
ATP binding Blast molecular function
GTP binding Blast molecular function
nucleus Blast cellular component
nucleoplasm Blast cellular component
Golgi apparatus Blast cellular component
nuclear body Blast cellular component
extracellular exosome Blast cellular component
intracellular organelle part Blast cellular component
intracellular non-membrane-bounded organelle Blast cellular component
macromolecular complex Blast cellular component
nuclear lumen Blast cellular component
sequence-specific double-stranded DNA binding Blast molecular function
cytoskeleton Blast cellular component
cation binding Blast molecular function
anion binding Blast molecular function
adenyl ribonucleotide binding Blast molecular function
chromatin binding Blast molecular function
adenyl nucleotide binding Blast molecular function
carbohydrate derivative binding Blast molecular function
organelle organization InterProScan biological process

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

25 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleotide binding Hs molecular function 40.4 1.54e-04
nucleosome Hs cellular component 87.0 1.06e-21
nuclear nucleosome Hs cellular component 40.4 1.54e-04
nuclear chromatin Hs cellular component 87.0 1.06e-21
DNA binding Hs molecular function 87.0 1.06e-21
AT DNA binding Hs molecular function 87.0 1.06e-21
double-stranded DNA binding Hs molecular function 87.0 1.06e-21
RNA binding Hs molecular function 87.0 1.06e-21
calcium ion binding Hs molecular function 40.4 1.54e-04
protein binding Hs molecular function 87.0 1.06e-21
ATP binding Hs molecular function 40.4 1.54e-04
GTP binding Hs molecular function 40.4 1.54e-04
nucleus Hs cellular component 87.0 1.06e-21
nucleoplasm Hs cellular component 87.0 1.06e-21
chromosome Hs cellular component 87.0 1.06e-21
nuclear euchromatin Hs cellular component 87.0 1.06e-21
nuclear heterochromatin Hs cellular component 40.4 1.54e-04
Golgi apparatus Hs cellular component 87.0 1.06e-21
actin cytoskeleton Hs cellular component 87.0 1.06e-21
AMP binding Hs molecular function 40.4 1.54e-04
nuclear body Hs cellular component 87.0 1.06e-21
chromatin DNA binding Hs molecular function 87.0 1.06e-21
dATP binding Hs molecular function 40.4 1.54e-04
ADP binding Hs molecular function 40.4 1.54e-04
extracellular exosome Hs cellular component 40.4 1.54e-04

GO (InterProScan)

4 results

GO Term Analysis Type e-value
nucleosome Pfam cellular component 1.2E-22
DNA binding Pfam molecular function 1.2E-22
nucleus Pfam cellular component 1.2E-22
nucleosome assembly Pfam biological process 1.2E-22