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GENE CARD

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Gene Card

Best human hits

FBXL15; FBXL4; FBXL7

Species

P.mammillata

Unique Gene ID

Phmamm.g00012624

Gene Model ID

Phmamm.CG.MTP2014.S890.g12624

Location

S890:19524..25882

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S890.g12624.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

7 results

AHC0AAA66YK21

Plate: Plate_66_K21

AHC0AAA77YA21

Plate: Plate_77_A21

AHC0AAA106YF16

Plate: Plate_106_F16

AHC0AAA106YF14

Plate: Plate_106_F14

AHC0AAA161YO10

Plate: Plate_161_O10

AHC0AAA192YD11

Plate: Plate_192_D11

AHC0AAA248YH12

Plate: Plate_248_H12

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
F-box_dom SMART F-box domain
Leu-rich_rpt_Cys-con_subtyp SMART Leucine-rich repeat, cysteine-containing subtype
F-box-like_dom_sf SUPERFAMILY F-box-like domain superfamily
F-box_dom ProSiteProfiles F-box domain
LRR_dom_sf Gene3D Leucine-rich repeat domain superfamily
F-box_dom Pfam F-box domain

GOSlim

17 results

GO Term Annotation Origin Type
protein polyubiquitination Orthology biological process
ubiquitin-protein transferase activity Orthology molecular function
protein binding Orthology molecular function
nucleus Orthology cellular component
cytoplasm Orthology cellular component
mitochondrion Orthology cellular component
centrosome Blast cellular component
microtubule organizing center Blast cellular component
cytosol Orthology cellular component
cytoskeleton Blast cellular component
nuclear speck Orthology cellular component
intracellular part Orthology cellular component
macromolecular complex Orthology cellular component
mitochondrial envelope Orthology cellular component
intracellular organelle lumen Orthology cellular component
proteolysis Orthology biological process
cellular protein modification process Orthology biological process

GO (Orthology)

12 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
ubiquitin ligase complex Hs cellular component
protein polyubiquitination Hs biological process
ubiquitin-protein transferase activity Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
cytoplasm Hs cellular component
mitochondrion Hs cellular component
mitochondrial intermembrane space Hs cellular component
cytosol Hs cellular component
ubiquitin-dependent protein catabolic process Hs biological process
nuclear speck Hs cellular component
post-translational protein modification Hs biological process

GO (Blast)

13 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
ubiquitin ligase complex Hs cellular component 187 1.52e-52
ubiquitin-protein transferase activity Hs molecular function 187 1.52e-52
protein binding Hs molecular function 187 1.52e-52
nucleus Hs cellular component 187 1.52e-52
cytoplasm Hs cellular component 187 1.52e-52
mitochondrion Hs cellular component 187 1.52e-52
mitochondrial intermembrane space Hs cellular component 187 1.52e-52
centrosome Hs cellular component 59.3 2.43e-09
microtubule organizing center Hs cellular component 59.3 2.43e-09
cytosol Hs cellular component 187 1.52e-52
cytoskeleton Hs cellular component 59.3 2.43e-09
nuclear speck Hs cellular component 187 1.52e-52
SCF ubiquitin ligase complex Hs cellular component 59.3 2.43e-09

GO (InterProScan)

1 result

GO Term Analysis Type e-value
protein binding SUPERFAMILY molecular function 3.53E-11