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  5. Gene 'Boleac.CG.SB_v3.S115...'

Gene Card

Best human hits

RNF20; RNF40

Species

B.leachii

Unique Gene ID

Boleac.g00001356

Gene Model ID

Boleac.CG.SB_v3.S1154.g01356

Location

S1154:9715..19190

Transcript Models and Sequences

  Boleac.CG.SB_v3.S1154.g01356.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
E3_ubiquit_lig_Bre1 PANTHER E3 ubiquitin ligase Bre1
Znf_RING ProSiteProfiles Zinc finger, RING-type
Znf_C3HC4_RING-type Pfam Zinc finger, C3HC4 RING-type
Znf_RING/FYVE/PHD Gene3D Zinc finger, RING/FYVE/PHD-type
Znf_RING_CS ProSitePatterns Zinc finger, RING-type, conserved site
Znf_RING SMART Zinc finger, RING-type

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

40 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
ubiquitin ligase complex Hs cellular component
protein polyubiquitination Hs biological process
p53 binding Hs molecular function
chromatin binding Hs molecular function
transcription coactivator activity Hs molecular function
mRNA 3'-UTR binding Hs molecular function
catalytic activity Hs molecular function
ubiquitin-protein transferase activity Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
nucleolus Hs cellular component
cytosol Hs cellular component
chromatin organization Hs biological process
regulation of transcription, DNA-templated Hs biological process
ubiquitin-dependent protein catabolic process Hs biological process
histone monoubiquitination Hs biological process
membrane Hs cellular component
protein ubiquitination Hs biological process
histone ubiquitination Hs biological process
transferase activity Hs molecular function
syntaxin-1 binding Hs molecular function
extrinsic component of membrane Hs cellular component
negative regulation of cell migration Hs biological process
positive regulation of histone methylation Hs biological process
ubiquitin conjugating enzyme binding Hs molecular function
ubiquitin protein ligase binding Hs molecular function
HULC complex Hs cellular component
histone H2B ubiquitination Hs biological process
histone binding Hs molecular function
protein homodimerization activity Hs molecular function
neuron projection Hs cellular component
response to peptide hormone Hs biological process
axon terminus Hs cellular component
positive regulation of transcription, DNA-templated Hs biological process
metal ion binding Hs molecular function
negative regulation of mRNA polyadenylation Hs biological process
positive regulation of proteasomal protein catabolic process Hs biological process
positive regulation of protein polyubiquitination Hs biological process
positive regulation of histone H2B ubiquitination Hs biological process

GO (Blast)

24 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
ubiquitin ligase complex Hs cellular component 327 2.87e-97
p53 binding Hs molecular function 296 4.20e-86
chromatin binding Hs molecular function 296 4.20e-86
transcription coactivator activity Hs molecular function 296 4.20e-86
mRNA 3'-UTR binding Hs molecular function 327 2.87e-97
catalytic activity Hs molecular function 296 4.20e-86
ubiquitin-protein transferase activity Hs molecular function 327 2.87e-97
protein binding Hs molecular function 327 2.87e-97
nucleus Hs cellular component 327 2.87e-97
nucleoplasm Hs cellular component 327 2.87e-97
nucleolus Hs cellular component 296 4.20e-86
cytosol Hs cellular component 327 2.87e-97
membrane Hs cellular component 327 2.87e-97
transferase activity Hs molecular function 327 2.87e-97
syntaxin-1 binding Hs molecular function 327 2.87e-97
extrinsic component of membrane Hs cellular component 327 2.87e-97
ubiquitin conjugating enzyme binding Hs molecular function 327 2.87e-97
ubiquitin protein ligase binding Hs molecular function 327 2.87e-97
HULC complex Hs cellular component 327 2.87e-97
histone binding Hs molecular function 296 4.20e-86
protein homodimerization activity Hs molecular function 327 2.87e-97
neuron projection Hs cellular component 327 2.87e-97
axon terminus Hs cellular component 327 2.87e-97
metal ion binding Hs molecular function 327 2.87e-97

GO (InterProScan)

3 results

GO Term Analysis Type e-value
ubiquitin-protein transferase activity PANTHER molecular function 5.7E-233
histone monoubiquitination PANTHER biological process 5.7E-233
metal ion binding Pfam molecular function 2.1E-4

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