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GENE CARD

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Gene Card

Best human hits

HMGB1; HMGB2; HMGB3

Species

B.leachii

Unique Gene ID

Boleac.g00002004

Gene Model ID

Boleac.CG.SB_v3.S127.g02004

Location

S127:187900..189328

Transcript Models and Sequences

  Boleac.CG.SB_v3.S127.g02004.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
HMG_box_dom ProSiteProfiles High mobility group box domain
HMG_box_dom_sf SUPERFAMILY High mobility group box domain superfamily
HMG_box_dom SMART High mobility group box domain
HMG_box_dom_sf Gene3D High mobility group box domain superfamily
HMG_box_dom Pfam High mobility group box domain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

54 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
four-way junction DNA binding Hs molecular function 202 4.72e-66
bubble DNA binding Hs molecular function 202 4.72e-66
nuclear chromatin Hs cellular component 188 8.28e-61
condensed chromosome Hs cellular component 202 4.72e-66
enhancer sequence-specific DNA binding Hs molecular function 188 8.28e-61
lipopolysaccharide binding Hs molecular function 202 4.72e-66
phosphatidylserine binding Hs molecular function 202 4.72e-66
DNA binding Hs molecular function 202 4.72e-66
damaged DNA binding Hs molecular function 202 4.72e-66
double-stranded DNA binding Hs molecular function 202 4.72e-66
single-stranded DNA binding Hs molecular function 202 4.72e-66
transcription factor activity, sequence-specific DNA binding Hs molecular function 202 4.72e-66
RNA binding Hs molecular function 202 4.72e-66
double-stranded RNA binding Hs molecular function 202 4.72e-66
single-stranded RNA binding Hs molecular function 202 4.72e-66
cytokine activity Hs molecular function 202 4.72e-66
integrin binding Hs molecular function 202 4.72e-66
protein binding Hs molecular function 202 4.72e-66
extracellular region Hs cellular component 202 4.72e-66
extracellular space Hs cellular component 202 4.72e-66
cell Hs cellular component 188 8.28e-61
nucleus Hs cellular component 202 4.72e-66
nucleoplasm Hs cellular component 202 4.72e-66
chromosome Hs cellular component 202 4.72e-66
nucleolus Hs cellular component 188 8.28e-61
cytoplasm Hs cellular component 202 4.72e-66
endosome Hs cellular component 202 4.72e-66
early endosome Hs cellular component 202 4.72e-66
endoplasmic reticulum-Golgi intermediate compartment Hs cellular component 202 4.72e-66
plasma membrane Hs cellular component 202 4.72e-66
transcription factor binding Hs molecular function 202 4.72e-66
drug binding Hs molecular function 188 8.28e-61
DNA binding, bending Hs molecular function 202 4.72e-66
cell surface Hs cellular component 202 4.72e-66
calcium-dependent protein kinase regulator activity Hs molecular function 202 4.72e-66
membrane Hs cellular component 202 4.72e-66
lyase activity Hs molecular function 202 4.72e-66
transcriptional repressor complex Hs cellular component 202 4.72e-66
protein domain specific binding Hs molecular function 188 8.28e-61
C-X-C chemokine binding Hs molecular function 202 4.72e-66
protein kinase activator activity Hs molecular function 202 4.72e-66
macromolecular complex Hs cellular component 188 8.28e-61
secretory granule lumen Hs cellular component 202 4.72e-66
alphav-beta3 integrin-HMGB1 complex Hs cellular component 202 4.72e-66
chemoattractant activity Hs molecular function 202 4.72e-66
neuron projection Hs cellular component 202 4.72e-66
transcription regulatory region DNA binding Hs molecular function 188 8.28e-61
non-sequence-specific DNA binding, bending Hs molecular function 188 8.28e-61
perinuclear region of cytoplasm Hs cellular component 188 8.28e-61
RAGE receptor binding Hs molecular function 202 4.72e-66
DNA polymerase binding Hs molecular function 202 4.72e-66
repressing transcription factor binding Hs molecular function 202 4.72e-66
supercoiled DNA binding Hs molecular function 202 4.72e-66
ficolin-1-rich granule lumen Hs cellular component 202 4.72e-66

GO (InterProScan)

No result

GO Term Analysis Type e-value