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Gene Card

Best human hits

SNRNP40; WDR5; WDR5B

Species

B.leachii

Unique Gene ID

Boleac.g00002287

Gene Model ID

Boleac.CG.SB_v3.S132.g02287

Location

S132:263028..269495

Transcript Models and Sequences

  Boleac.CG.SB_v3.S132.g02287.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

8 results

IPR Term Analysis Definition
WD40_repeat ProSiteProfiles WD40 repeat
WD40/YVTN_repeat-like_dom_sf Gene3D WD40/YVTN repeat-like-containing domain superfamily
WD40_repeat_dom ProSiteProfiles WD40-repeat-containing domain
WD40_repeat_CS ProSitePatterns WD40 repeat, conserved site
WD40_repeat_dom_sf SUPERFAMILY WD40-repeat-containing domain superfamily
WD40_repeat Pfam WD40 repeat
WD40_repeat SMART WD40 repeat
G-protein_beta_WD-40_rep PRINTS G-protein beta WD-40 repeat

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

19 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
RNA splicing, via transesterification reactions Hs biological process
mRNA splicing, via spliceosome Hs biological process
RNA binding Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
spliceosomal complex Hs cellular component
U5 snRNP Hs cellular component
small nucleolar ribonucleoprotein complex Hs cellular component
cytosol Hs cellular component
RNA processing Hs biological process
mRNA processing Hs biological process
RNA splicing Hs biological process
membrane Hs cellular component
integral component of membrane Hs cellular component
nuclear speck Hs cellular component
U2-type catalytic step 2 spliceosome Hs cellular component
precatalytic spliceosome Hs cellular component
catalytic step 2 spliceosome Hs cellular component

GO (Blast)

28 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
histone acetyltransferase complex Hs cellular component 138 2.67e-38
RNA binding Hs molecular function 387 2.72e-135
protein binding Hs molecular function 387 2.72e-135
intracellular Hs cellular component 138 2.67e-38
nucleus Hs cellular component 387 2.72e-135
nucleoplasm Hs cellular component 387 2.72e-135
Ada2/Gcn5/Ada3 transcription activator complex Hs cellular component 138 2.67e-38
spliceosomal complex Hs cellular component 387 2.72e-135
U5 snRNP Hs cellular component 387 2.72e-135
small nucleolar ribonucleoprotein complex Hs cellular component 387 2.72e-135
cytosol Hs cellular component 387 2.72e-135
membrane Hs cellular component 387 2.72e-135
integral component of membrane Hs cellular component 387 2.72e-135
nuclear speck Hs cellular component 387 2.72e-135
histone-lysine N-methyltransferase activity Hs molecular function 138 2.67e-38
methylated histone binding Hs molecular function 138 2.67e-38
histone methyltransferase complex Hs cellular component 138 2.67e-38
ciliary basal body Hs cellular component 138 2.67e-38
histone methyltransferase activity (H3-K4 specific) Hs molecular function 138 2.67e-38
histone acetyltransferase activity (H4-K5 specific) Hs molecular function 138 2.67e-38
histone acetyltransferase activity (H4-K8 specific) Hs molecular function 138 2.67e-38
MLL3/4 complex Hs cellular component 138 2.67e-38
histone acetyltransferase activity (H4-K16 specific) Hs molecular function 138 2.67e-38
Set1C/COMPASS complex Hs cellular component 138 2.67e-38
U2-type catalytic step 2 spliceosome Hs cellular component 387 2.72e-135
precatalytic spliceosome Hs cellular component 387 2.72e-135
catalytic step 2 spliceosome Hs cellular component 387 2.72e-135
MLL1 complex Hs cellular component 138 2.67e-38

GO (InterProScan)

1 result

GO Term Analysis Type e-value
protein binding SUPERFAMILY molecular function 8.24E-69

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