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GENE CARD

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Gene Card

Best human hits

AP3D1; COPB1; TM2D1

Species

B.leachii

Unique Gene ID

Boleac.g00003491

Gene Model ID

Boleac.CG.SB_v3.S164.g03491

Location

S164:176403..184377

Transcript Models and Sequences

  Boleac.CG.SB_v3.S164.g03491.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

7 results

IPR Term Analysis Definition
ARM-like Gene3D Armadillo-like helical
Coatomer_bsu_C Pfam Coatomer beta subunit, C-terminal
ARM-type_fold SUPERFAMILY Armadillo-type fold
Clathrin/coatomer_adapt-like_N Pfam Clathrin/coatomer adaptor, adaptin-like, N-terminal
COPB1 PANTHER Coatomer beta subunit (COPB1)
COPB1 PIRSF Coatomer beta subunit (COPB1)
COPB1_appendage_platform_dom Pfam Coatomer beta subunit, appendage platform domain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

29 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
Golgi membrane Hs cellular component
structural molecule activity Hs molecular function
binding Hs molecular function
protein binding Hs molecular function
cytoplasm Hs cellular component
endoplasmic reticulum membrane Hs cellular component
endoplasmic reticulum-Golgi intermediate compartment Hs cellular component
Golgi apparatus Hs cellular component
Golgi-associated vesicle Hs cellular component
cytosol Hs cellular component
plasma membrane Hs cellular component
intracellular protein transport Hs biological process
ER to Golgi vesicle-mediated transport Hs biological process
retrograde vesicle-mediated transport, Golgi to ER Hs biological process
intra-Golgi vesicle-mediated transport Hs biological process
protein transport Hs biological process
membrane Hs cellular component
viral process Hs biological process
vesicle-mediated transport Hs biological process
membrane coat Hs cellular component
COPI vesicle coat Hs cellular component
transport vesicle Hs cellular component
COPI-coated vesicle Hs cellular component
COPI-coated vesicle membrane Hs cellular component
secretory granule membrane Hs cellular component
cytoplasmic vesicle Hs cellular component
intracellular membrane-bounded organelle Hs cellular component
tertiary granule membrane Hs cellular component
ficolin-1-rich granule membrane Hs cellular component

GO (Blast)

37 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
Golgi membrane Hs cellular component 1421 0.0
amyloid-beta binding Hs molecular function 74.3 2.41e-14
G-protein coupled receptor activity Hs molecular function 74.3 2.41e-14
structural molecule activity Hs molecular function 1421 0.0
transporter activity Hs molecular function 79.0 1.17e-14
binding Hs molecular function 1421 0.0
protein binding Hs molecular function 1421 0.0
nucleus Hs cellular component 74.3 2.41e-14
nucleoplasm Hs cellular component 74.3 2.41e-14
cytoplasm Hs cellular component 1421 0.0
lysosomal membrane Hs cellular component 79.0 1.17e-14
endoplasmic reticulum membrane Hs cellular component 1421 0.0
endoplasmic reticulum-Golgi intermediate compartment Hs cellular component 1421 0.0
Golgi apparatus Hs cellular component 1421 0.0
Golgi-associated vesicle Hs cellular component 1421 0.0
cytosol Hs cellular component 1421 0.0
plasma membrane Hs cellular component 1421 0.0
integral component of plasma membrane Hs cellular component 74.3 2.41e-14
endosome membrane Hs cellular component 79.0 1.17e-14
membrane Hs cellular component 1421 0.0
integral component of membrane Hs cellular component 74.3 2.41e-14
membrane coat Hs cellular component 1421 0.0
AP-3 adaptor complex Hs cellular component 79.0 1.17e-14
COPI vesicle coat Hs cellular component 1421 0.0
transport vesicle Hs cellular component 1421 0.0
COPI-coated vesicle Hs cellular component 1421 0.0
axon Hs cellular component 79.0 1.17e-14
COPI-coated vesicle membrane Hs cellular component 1421 0.0
secretory granule membrane Hs cellular component 1421 0.0
cytoplasmic vesicle Hs cellular component 1421 0.0
terminal bouton Hs cellular component 79.0 1.17e-14
intracellular membrane-bounded organelle Hs cellular component 1421 0.0
tertiary granule membrane Hs cellular component 1421 0.0
postsynapse Hs cellular component 79.0 1.17e-14
presynaptic endosome Hs cellular component 79.0 1.17e-14
ficolin-1-rich granule membrane Hs cellular component 1421 0.0
axon cytoplasm Hs cellular component 79.0 1.17e-14

GO (InterProScan)

7 results

GO Term Analysis Type e-value
structural molecule activity Pfam molecular function 8.4E-60
binding SUPERFAMILY molecular function 5.12E-79
cytoplasm PIRSF cellular component 0.0
intracellular protein transport PIRSF biological process 0.0
vesicle-mediated transport Pfam biological process 1.2E-112
membrane coat Pfam cellular component 1.2E-112
COPI vesicle coat Pfam cellular component 8.4E-60