Login
Help

GENE CARD

Submit your Data

Gene Card

Best human hits

H1FOO

Species

B.leachii

Unique Gene ID

Boleac.g00003942

Gene Model ID

Boleac.CG.SB_v3.S18.g03942

Location

S18:161796..164617

Transcript Models and Sequences

  Boleac.CG.SB_v3.S18.g03942.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
WH_DNA-bd_sf SUPERFAMILY Winged helix DNA-binding domain superfamily
Histone_H1/H5_H15 ProSiteProfiles Linker histone H1/H5, domain H15
Histone_H1/H5_H15 Pfam Linker histone H1/H5, domain H15
Histone_H1/H5_H15 SMART Linker histone H1/H5, domain H15
WH-like_DNA-bd_sf Gene3D Winged helix-like DNA-binding domain superfamily

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

12 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
nucleosome Hs cellular component
DNA binding Hs molecular function
nucleus Hs cellular component
chromosome Hs cellular component
cytoplasm Hs cellular component
nucleosome assembly Hs biological process
nucleosome positioning Hs biological process
nucleosomal DNA binding Hs molecular function
regulation of DNA methylation Hs biological process
meiotic cell cycle Hs biological process
extracellular exosome Hs cellular component
negative regulation of stem cell differentiation Hs biological process

GO (Blast)

7 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleosome Hs cellular component 54.7 1.99e-08
DNA binding Hs molecular function 54.7 1.99e-08
nucleus Hs cellular component 54.7 1.99e-08
chromosome Hs cellular component 54.7 1.99e-08
cytoplasm Hs cellular component 54.7 1.99e-08
nucleosomal DNA binding Hs molecular function 54.7 1.99e-08
extracellular exosome Hs cellular component 54.7 1.99e-08

GO (InterProScan)

4 results

GO Term Analysis Type e-value
nucleosome Pfam cellular component 1.3E-17
DNA binding Pfam molecular function 1.3E-17
nucleus Pfam cellular component 1.3E-17
nucleosome assembly Pfam biological process 1.3E-17