Aniseed - Gene card

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

10 results

IPR Term	Analysis	Definition
Helicase_C	CDD	Helicase, C-terminal
Helicase_ATP-bd	ProSiteProfiles	Helicase superfamily 1/2, ATP-binding domain
Helicase_C	ProSiteProfiles	Helicase, C-terminal
RNA_helicase_DEAD_Q_motif	ProSiteProfiles	RNA helicase, DEAD-box type, Q motif
Helicase_ATP-bd	SMART	Helicase superfamily 1/2, ATP-binding domain
DEAD/DEAH_box_helicase_dom	Pfam	DEAD/DEAH box helicase domain
P-loop_NTPase	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolase
RNA-helicase_DEAD-box_CS	ProSitePatterns	ATP-dependent RNA helicase DEAD-box, conserved site
Helicase_C	SMART	Helicase, C-terminal
Helicase_C	Pfam	Helicase, C-terminal

GOSlim

No result

GO Term	Annotation Origin	Type

GO (Orthology)

32 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
nucleotide binding	Hs	molecular function
heterochromatin	Hs	cellular component
P-body	Hs	cellular component
outer dense fiber	Hs	cellular component
nucleic acid binding	Hs	molecular function
RNA binding	Hs	molecular function
RNA helicase activity	Hs	molecular function
ATP-dependent RNA helicase activity	Hs	molecular function
helicase activity	Hs	molecular function
protein binding	Hs	molecular function
ATP binding	Hs	molecular function
nucleus	Hs	cellular component
nucleolus	Hs	cellular component
cytoplasm	Hs	cellular component
mitochondrion	Hs	cellular component
cytosol	Hs	cellular component
regulation of translation	Hs	biological process
spermatogenesis	Hs	biological process
cytoplasmic stress granule	Hs	cellular component
RNA secondary structure unwinding	Hs	biological process
membrane	Hs	cellular component
RISC complex	Hs	cellular component
hydrolase activity	Hs	molecular function
stem cell population maintenance	Hs	biological process
protein domain specific binding	Hs	molecular function
cytoplasmic mRNA processing body assembly	Hs	biological process
cytoplasmic ribonucleoprotein granule	Hs	cellular component
P granule	Hs	cellular component
exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay	Hs	biological process
cadherin binding	Hs	molecular function
negative regulation of neuron differentiation	Hs	biological process
sperm annulus	Hs	cellular component

GO (Blast)

44 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
nucleotide binding	Hs	molecular function	688	0.0
RNA cap binding	Hs	molecular function	259	3.12e-82
heterochromatin	Hs	cellular component	688	0.0
P-body	Hs	cellular component	688	0.0
outer dense fiber	Hs	cellular component	688	0.0
nucleic acid binding	Hs	molecular function	688	0.0
RNA binding	Hs	molecular function	688	0.0
RNA helicase activity	Hs	molecular function	688	0.0
double-stranded RNA binding	Hs	molecular function	259	3.12e-82
mRNA binding	Hs	molecular function	278	3.12e-89
translation initiation factor activity	Hs	molecular function	259	3.12e-82
ATP-dependent RNA helicase activity	Hs	molecular function	688	0.0
helicase activity	Hs	molecular function	688	0.0
protein binding	Hs	molecular function	688	0.0
ATP binding	Hs	molecular function	688	0.0
nucleus	Hs	cellular component	688	0.0
nucleoplasm	Hs	cellular component	278	3.12e-89
spliceosomal complex	Hs	cellular component	278	3.12e-89
nucleolus	Hs	cellular component	688	0.0
cytoplasm	Hs	cellular component	688	0.0
mitochondrion	Hs	cellular component	688	0.0
cytosol	Hs	cellular component	688	0.0
translation factor activity, RNA binding	Hs	molecular function	259	3.12e-82
poly(A) binding	Hs	molecular function	278	3.12e-89
cytoplasmic stress granule	Hs	cellular component	688	0.0
membrane	Hs	cellular component	688	0.0
eukaryotic translation initiation factor 4F complex	Hs	cellular component	259	3.12e-82
RISC complex	Hs	cellular component	688	0.0
nuclear speck	Hs	cellular component	278	3.12e-89
hydrolase activity	Hs	molecular function	688	0.0
protein domain specific binding	Hs	molecular function	688	0.0
dendrite	Hs	cellular component	278	3.12e-89
intracellular ribonucleoprotein complex	Hs	cellular component	278	3.12e-89
exon-exon junction complex	Hs	cellular component	278	3.12e-89
selenocysteine insertion sequence binding	Hs	molecular function	278	3.12e-89
RNA stem-loop binding	Hs	molecular function	278	3.12e-89
cytoplasmic ribonucleoprotein granule	Hs	cellular component	688	0.0
ribonucleoprotein complex binding	Hs	molecular function	278	3.12e-89
neuronal cell body	Hs	cellular component	278	3.12e-89
P granule	Hs	cellular component	688	0.0
cadherin binding	Hs	molecular function	688	0.0
extracellular exosome	Hs	cellular component	259	3.12e-82
catalytic step 2 spliceosome	Hs	cellular component	278	3.12e-89
sperm annulus	Hs	cellular component	688	0.0

GO (InterProScan)

2 results

GO Term	Analysis	Type	e-value
nucleic acid binding	Pfam	molecular function	2.7E-41
ATP binding	Pfam	molecular function	2.7E-41

Gene Card

Best human hits

Species

Unique Gene ID

Gene Model ID

Location

Transcript Models and Sequences

External database links

Regulatory Regions

InterPro

GOSlim

GO (Orthology)

GO (Blast)

GO (InterProScan)