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GENE CARD

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  1. Gene 'Phmamm.CG.MTP2014.S2...'
  2. Gene 'Boleac.CG.SB_v3.S43....'

Gene Card

Best human hits

VPS72

Species

B.leachii

Unique Gene ID

Boleac.g00004230

Gene Model ID

Boleac.CG.SB_v3.S19.g04230

Location

S19:351505..352450

Transcript Models and Sequences

  Boleac.CG.SB_v3.S19.g04230.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term Analysis Definition
Vps72/YL1 PANTHER Vps72/YL1 family
Vps72/YL1_C Pfam Vps72/YL1, C-terminal
Vps72/YL1 Pfam Vps72/YL1 family
Vps72/YL1_C SMART Vps72/YL1, C-terminal

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

14 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
negative regulation of transcription from RNA polymerase II promoter Hs biological process
DNA binding Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
chromatin organization Hs biological process
chromatin remodeling Hs biological process
transcription, DNA-templated Hs biological process
regulation of transcription, DNA-templated Hs biological process
nuclear speck Hs cellular component
macromolecular complex Hs cellular component
somatic stem cell population maintenance Hs biological process
histone binding Hs molecular function
histone exchange Hs biological process

GO (Blast)

7 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
DNA binding Hs molecular function 177 7.02e-53
protein binding Hs molecular function 177 7.02e-53
nucleus Hs cellular component 177 7.02e-53
nucleoplasm Hs cellular component 177 7.02e-53
nuclear speck Hs cellular component 177 7.02e-53
macromolecular complex Hs cellular component 177 7.02e-53
histone binding Hs molecular function 177 7.02e-53

GO (InterProScan)

4 results

GO Term Analysis Type e-value
nucleus PANTHER cellular component 2.5E-75
chromatin remodeling PANTHER biological process 2.5E-75
regulation of transcription, DNA-templated PANTHER biological process 2.5E-75
histone exchange PANTHER biological process 2.5E-75