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GENE CARD

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Gene Card

Best human hits

TRIM3; TRIM33; TRIM45

Species

B.leachii

Unique Gene ID

Boleac.g00004508

Gene Model ID

Boleac.CG.SB_v3.S2.g04508

Location

S2:15979..18063

Transcript Models and Sequences

  Boleac.CG.SB_v3.S2.g04508.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

10 results

IPR Term Analysis Definition
Znf_B-box CDD B-box-type zinc finger
Filamin/ABP280_repeat-like ProSiteProfiles Filamin/ABP280 repeat-like
Bbox_C SMART B-box, C-terminal
Filamin/ABP280_rpt SMART Filamin/ABP280 repeat
Znf_B-box Pfam B-box-type zinc finger
Ig-like_fold Gene3D Immunoglobulin-like fold
Znf_B-box ProSiteProfiles B-box-type zinc finger
Filamin/ABP280_repeat-like Pfam Filamin/ABP280 repeat-like
Znf_B-box SMART B-box-type zinc finger
Ig_E-set SUPERFAMILY Immunoglobulin E-set

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

10 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
protein binding Hs molecular function
intracellular Hs cellular component
nucleus Hs cellular component
nucleoplasm Hs cellular component
cytoplasm Hs cellular component
cytosol Hs cellular component
zinc ion binding Hs molecular function
intercellular bridge Hs cellular component
metal ion binding Hs molecular function
bone development Hs biological process

GO (Blast)

21 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
DNA binding Hs molecular function 97.8 2.40e-21
ubiquitin-protein transferase activity Hs molecular function 99.4 6.08e-22
protein binding Hs molecular function 238 1.27e-71
intracellular Hs cellular component 238 1.27e-71
nucleus Hs cellular component 238 1.27e-71
nucleoplasm Hs cellular component 238 1.27e-71
cytoplasm Hs cellular component 238 1.27e-71
endosome Hs cellular component 99.4 6.08e-22
early endosome Hs cellular component 99.4 6.08e-22
Golgi apparatus Hs cellular component 99.4 6.08e-22
cytosol Hs cellular component 238 1.27e-71
protein C-terminus binding Hs molecular function 99.4 6.08e-22
zinc ion binding Hs molecular function 238 1.27e-71
transferase activity Hs molecular function 97.8 2.40e-21
dendrite Hs cellular component 99.4 6.08e-22
cell projection Hs cellular component 99.4 6.08e-22
intercellular bridge Hs cellular component 238 1.27e-71
metal ion binding Hs molecular function 238 1.27e-71
ubiquitin protein ligase activity Hs molecular function 99.4 6.08e-22
co-SMAD binding Hs molecular function 97.8 2.40e-21
R-SMAD binding Hs molecular function 97.8 2.40e-21

GO (InterProScan)

3 results

GO Term Analysis Type e-value
protein binding SMART molecular function 0.0019
intracellular Pfam cellular component 1.3E-7
zinc ion binding Pfam molecular function 1.3E-7