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GENE CARD

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  1. Gene 'Moocci.CG.ELv1_2.S25...'
  2. Gene 'Boleac.CG.SB_v3.S22....'

Gene Card

Best human hits

RPL6

Species

B.leachii

Unique Gene ID

Boleac.g00005176

Gene Model ID

Boleac.CG.SB_v3.S22.g05176

Location

S22:361886..365089

Transcript Models and Sequences

  Boleac.CG.SB_v3.S22.g05176.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
60S_ribosomal_L6E Pfam 60S ribosomal protein L6E
Rib_L2_dom2 Gene3D Ribosomal protein L2, domain 2
Translation_prot_SH3-like_sf SUPERFAMILY Translation protein SH3-like domain superfamily
60S_ribosomal_L6E PANTHER 60S ribosomal protein L6E
Ribosomal_L6_N Pfam Ribosomal protein L6, N-terminal

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

25 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
ribosomal large subunit assembly Hs biological process
nuclear-transcribed mRNA catabolic process, nonsense-mediated decay Hs biological process
cytoplasmic translation Hs biological process
DNA binding Hs molecular function
RNA binding Hs molecular function
structural constituent of ribosome Hs molecular function
intracellular Hs cellular component
nucleus Hs cellular component
cytoplasm Hs cellular component
endoplasmic reticulum Hs cellular component
rough endoplasmic reticulum Hs cellular component
cytosol Hs cellular component
ribosome Hs cellular component
focal adhesion Hs cellular component
regulation of transcription, DNA-templated Hs biological process
rRNA processing Hs biological process
translation Hs biological process
translational initiation Hs biological process
SRP-dependent cotranslational protein targeting to membrane Hs biological process
membrane Hs cellular component
cytosolic large ribosomal subunit Hs cellular component
intracellular ribonucleoprotein complex Hs cellular component
cytoplasmic ribonucleoprotein granule Hs cellular component
polysomal ribosome Hs cellular component
cadherin binding Hs molecular function

GO (Blast)

17 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
DNA binding Hs molecular function 287 1.65e-97
RNA binding Hs molecular function 287 1.65e-97
structural constituent of ribosome Hs molecular function 287 1.65e-97
intracellular Hs cellular component 287 1.65e-97
nucleus Hs cellular component 287 1.65e-97
cytoplasm Hs cellular component 287 1.65e-97
endoplasmic reticulum Hs cellular component 287 1.65e-97
rough endoplasmic reticulum Hs cellular component 287 1.65e-97
cytosol Hs cellular component 287 1.65e-97
ribosome Hs cellular component 287 1.65e-97
focal adhesion Hs cellular component 287 1.65e-97
membrane Hs cellular component 287 1.65e-97
cytosolic large ribosomal subunit Hs cellular component 287 1.65e-97
intracellular ribonucleoprotein complex Hs cellular component 287 1.65e-97
cytoplasmic ribonucleoprotein granule Hs cellular component 287 1.65e-97
polysomal ribosome Hs cellular component 287 1.65e-97
cadherin binding Hs molecular function 287 1.65e-97

GO (InterProScan)

4 results

GO Term Analysis Type e-value
structural constituent of ribosome PANTHER molecular function 4.3E-99
intracellular PANTHER cellular component 4.3E-99
ribosome PANTHER cellular component 4.3E-99
translation PANTHER biological process 4.3E-99