Gene Card
Best human hits
CLP1; NOL9; UBAC1
Species
Unique Gene ID
Boleac.g00005198
Gene Model ID
Boleac.CG.SB_v3.S220.g05198
Location
S220:17506..20586
Transcript Models and Sequences
n/a
You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see how you can interact with this tree
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
11 results
| IPR Term | Analysis | Definition |
|---|---|---|
| UBA | SMART | Ubiquitin-associated domain |
| Clp1_N | Pfam | Clp1, N-terminal beta-sandwich domain |
| UBA | Pfam | Ubiquitin-associated domain |
| P-loop_NTPase | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolase |
| Clp1_C_sf | Gene3D | Clp1, C-terminal domain superfamily |
| UBA | ProSiteProfiles | Ubiquitin-associated domain |
| UBA-like_sf | SUPERFAMILY | UBA-like superfamily |
| Clp1 | Hamap | Polyribonucleotide 5-hydroxyl-kinase Clp1 |
| CLP1_P | Pfam | Polyribonucleotide 5'-hydroxyl-kinase Clp1, P-loop domain |
| Clp1_N_sf | Gene3D | Clp1, N-terminal beta-sandwich domain superfamily |
| Clp1_C | Pfam | Pre-mRNA cleavage complex subunit Clp1, C-terminal |
| GO Term | Annotation Origin | Type |
|---|
GO (Orthology)
7 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|---|---|
| protein binding | Hs | molecular function |
| cytoplasm | Hs | cellular component |
| Golgi apparatus | Hs | cellular component |
| cytosol | Hs | cellular component |
| plasma membrane | Hs | cellular component |
| protein ubiquitination | Hs | biological process |
| extracellular exosome | Hs | cellular component |
GO (Blast)
22 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| nucleotide binding | Hs | molecular function | 514 | 7.14e-177 |
| tRNA-intron endonuclease complex | Hs | cellular component | 514 | 7.14e-177 |
| RNA binding | Hs | molecular function | 49.3 | 8.39e-06 |
| protein binding | Hs | molecular function | 144 | 3.16e-37 |
| ATP binding | Hs | molecular function | 514 | 7.14e-177 |
| nucleus | Hs | cellular component | 514 | 7.14e-177 |
| nucleoplasm | Hs | cellular component | 514 | 7.14e-177 |
| nucleolus | Hs | cellular component | 49.3 | 8.39e-06 |
| cytoplasm | Hs | cellular component | 144 | 3.16e-37 |
| Golgi apparatus | Hs | cellular component | 144 | 3.16e-37 |
| cytosol | Hs | cellular component | 514 | 7.14e-177 |
| mRNA cleavage factor complex | Hs | cellular component | 514 | 7.14e-177 |
| plasma membrane | Hs | cellular component | 144 | 3.16e-37 |
| membrane | Hs | cellular component | 49.3 | 8.39e-06 |
| kinase activity | Hs | molecular function | 514 | 7.14e-177 |
| transferase activity | Hs | molecular function | 514 | 7.14e-177 |
| intermediate filament cytoskeleton | Hs | cellular component | 49.3 | 8.39e-06 |
| ATP-dependent polydeoxyribonucleotide 5'-hydroxyl-kinase activity | Hs | molecular function | 514 | 7.14e-177 |
| polynucleotide 5'-hydroxyl-kinase activity | Hs | molecular function | 49.3 | 8.39e-06 |
| polydeoxyribonucleotide kinase activity | Hs | molecular function | 514 | 7.14e-177 |
| ATP-dependent polyribonucleotide 5'-hydroxyl-kinase activity | Hs | molecular function | 514 | 7.14e-177 |
| extracellular exosome | Hs | cellular component | 144 | 3.16e-37 |
GO (InterProScan)
3 results
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| protein binding | SUPERFAMILY | molecular function | 1.23E-12 |
| mRNA cleavage factor complex | Hamap | cellular component | 26.237 |
| mRNA 3'-end processing | Pfam | biological process | 1.6E-18 |
