Login
Help

GENE CARD

Submit your Data

  1. Gene 'Boleac.CG.SB_v3.S23....'

Gene Card

Best human hits

USO1

Species

B.leachii

Unique Gene ID

Boleac.g00005416

Gene Model ID

Boleac.CG.SB_v3.S23.g05416

Location

S23:150995..155050

Transcript Models and Sequences

  Boleac.CG.SB_v3.S23.g05416.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
Armadillo SMART Armadillo
ARM-type_fold SUPERFAMILY Armadillo-type fold
Vesicle_Uso1_P115_head Pfam Vesicle tethering protein Uso1/P115-like , head domain
Armadillo ProSiteProfiles Armadillo
ARM-like Gene3D Armadillo-like helical

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

26 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
Golgi membrane Hs cellular component
fibrillar center Hs cellular component
RNA binding Hs molecular function
binding Hs molecular function
protein binding Hs molecular function
cytoplasm Hs cellular component
endoplasmic reticulum Hs cellular component
Golgi apparatus Hs cellular component
Golgi stack Hs cellular component
cytosol Hs cellular component
intracellular protein transport Hs biological process
ER to Golgi vesicle-mediated transport Hs biological process
Golgi organization Hs biological process
protein transporter activity Hs molecular function
ER to Golgi transport vesicle membrane Hs cellular component
protein transport Hs biological process
membrane Hs cellular component
vesicle-mediated transport Hs biological process
transport vesicle Hs cellular component
transcytosis Hs biological process
cadherin binding Hs molecular function
COPII vesicle coating Hs biological process
Golgi vesicle docking Hs biological process
vesicle fusion with Golgi apparatus Hs biological process
perinuclear region of cytoplasm Hs cellular component
membrane fusion Hs biological process

GO (Blast)

16 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
Golgi membrane Hs cellular component 779 0.0
fibrillar center Hs cellular component 779 0.0
RNA binding Hs molecular function 779 0.0
binding Hs molecular function 779 0.0
protein binding Hs molecular function 779 0.0
cytoplasm Hs cellular component 779 0.0
endoplasmic reticulum Hs cellular component 779 0.0
Golgi apparatus Hs cellular component 779 0.0
Golgi stack Hs cellular component 779 0.0
cytosol Hs cellular component 779 0.0
protein transporter activity Hs molecular function 779 0.0
ER to Golgi transport vesicle membrane Hs cellular component 779 0.0
membrane Hs cellular component 779 0.0
transport vesicle Hs cellular component 779 0.0
cadherin binding Hs molecular function 779 0.0
perinuclear region of cytoplasm Hs cellular component 779 0.0

GO (InterProScan)

6 results

GO Term Analysis Type e-value
Golgi membrane Pfam cellular component 3.9E-56
binding SUPERFAMILY molecular function 1.73E-20
protein binding ProSiteProfiles molecular function 8.697
cytoplasm Pfam cellular component 3.9E-56
intracellular protein transport Pfam biological process 3.9E-56
vesicle fusion with Golgi apparatus Pfam biological process 3.9E-56