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GENE CARD

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Gene Card

Best human hits

COPA; PKD2; PKD2L1

Species

B.leachii

Unique Gene ID

Boleac.g00005951

Gene Model ID

Boleac.CG.SB_v3.S25.g05951

Location

S25:78138..93563

Transcript Models and Sequences

  Boleac.CG.SB_v3.S25.g05951.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

17 results

IPR Term Analysis Definition
WD40_repeat_dom_sf SUPERFAMILY WD40-repeat-containing domain superfamily
Coatomer_asu_C Pfam Coatomer, alpha subunit, C-terminal
WD40_repeat SMART WD40 repeat
WD40_repeat ProSiteProfiles WD40 repeat
WD40_repeat_CS ProSitePatterns WD40 repeat, conserved site
EF_hand_dom ProSiteProfiles EF-hand domain
Volt_channel_dom_sf Gene3D Voltage-dependent channel domain superfamily
EF-hand-dom_pair SUPERFAMILY EF-hand domain pair
WD40_repeat Pfam WD40 repeat
WD40_repeat_dom ProSiteProfiles WD40-repeat-containing domain
EF_Hand_1_Ca_BS ProSitePatterns EF-Hand 1, calcium-binding site
Coatomer_WD-assoc_reg Pfam Coatomer, WD associated region
EF_hand_dom SMART EF-hand domain
G-protein_beta_WD-40_rep PRINTS G-protein beta WD-40 repeat
PKD_2 PRINTS Polycystic kidney disease type 2 protein
WD40/YVTN_repeat-like_dom_sf Gene3D WD40/YVTN repeat-like-containing domain superfamily
PKD1_2_channel Pfam Polycystin cation channel, PKD1/PKD2

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

24 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
Golgi membrane Hs cellular component
hormone activity Hs molecular function
structural molecule activity Hs molecular function
protein binding Hs molecular function
extracellular region Hs cellular component
extracellular space Hs cellular component
cytoplasm Hs cellular component
endoplasmic reticulum membrane Hs cellular component
Golgi apparatus Hs cellular component
cytosol Hs cellular component
intracellular protein transport Hs biological process
ER to Golgi vesicle-mediated transport Hs biological process
retrograde vesicle-mediated transport, Golgi to ER Hs biological process
intra-Golgi vesicle-mediated transport Hs biological process
regulation of receptor activity Hs biological process
protein transport Hs biological process
membrane Hs cellular component
vesicle-mediated transport Hs biological process
membrane coat Hs cellular component
COPI vesicle coat Hs cellular component
transport vesicle Hs cellular component
COPI-coated vesicle membrane Hs cellular component
cytoplasmic vesicle Hs cellular component
extracellular exosome Hs cellular component

GO (Blast)

72 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
Golgi membrane Hs cellular component 1680 0.0
polycystin complex Hs cellular component 737 0.0
receptor binding Hs molecular function 737 0.0
hormone activity Hs molecular function 1680 0.0
structural molecule activity Hs molecular function 1680 0.0
calcium activated cation channel activity Hs molecular function 753 0.0
voltage-gated ion channel activity Hs molecular function 737 0.0
voltage-gated calcium channel activity Hs molecular function 737 0.0
voltage-gated sodium channel activity Hs molecular function 737 0.0
voltage-gated potassium channel activity Hs molecular function 737 0.0
cation channel activity Hs molecular function 753 0.0
calcium channel activity Hs molecular function 753 0.0
potassium channel activity Hs molecular function 737 0.0
sodium channel activity Hs molecular function 753 0.0
calcium ion binding Hs molecular function 753 0.0
protein binding Hs molecular function 1680 0.0
extracellular region Hs cellular component 1680 0.0
extracellular space Hs cellular component 1680 0.0
cytoplasm Hs cellular component 1680 0.0
endoplasmic reticulum Hs cellular component 753 0.0
endoplasmic reticulum membrane Hs cellular component 1680 0.0
Golgi apparatus Hs cellular component 1680 0.0
cytosol Hs cellular component 1680 0.0
plasma membrane Hs cellular component 753 0.0
integral component of plasma membrane Hs cellular component 737 0.0
cell-cell junction Hs cellular component 737 0.0
cilium Hs cellular component 753 0.0
cytoskeletal protein binding Hs molecular function 753 0.0
cation transmembrane transporter activity Hs molecular function 753 0.0
basal plasma membrane Hs cellular component 737 0.0
cell surface Hs cellular component 753 0.0
channel activity Hs molecular function 737 0.0
calcium-activated potassium channel activity Hs molecular function 753 0.0
outward rectifier potassium channel activity Hs molecular function 737 0.0
membrane Hs cellular component 1680 0.0
integral component of membrane Hs cellular component 753 0.0
basolateral plasma membrane Hs cellular component 737 0.0
voltage-gated cation channel activity Hs molecular function 737 0.0
lamellipodium Hs cellular component 737 0.0
membrane coat Hs cellular component 1680 0.0
COPI vesicle coat Hs cellular component 1680 0.0
transport vesicle Hs cellular component 1680 0.0
cytoplasmic vesicle membrane Hs cellular component 737 0.0
COPI-coated vesicle membrane Hs cellular component 1680 0.0
cytoplasmic vesicle Hs cellular component 1680 0.0
motile cilium Hs cellular component 737 0.0
filamentous actin Hs cellular component 737 0.0
sour taste receptor activity Hs molecular function 753 0.0
cation channel complex Hs cellular component 753 0.0
calcium channel complex Hs cellular component 753 0.0
ciliary basal body Hs cellular component 737 0.0
identical protein binding Hs molecular function 753 0.0
protein homodimerization activity Hs molecular function 737 0.0
actinin binding Hs molecular function 737 0.0
cell projection Hs cellular component 753 0.0
intracellular membrane-bounded organelle Hs cellular component 753 0.0
receptor complex Hs cellular component 753 0.0
HLH domain binding Hs molecular function 737 0.0
ion channel binding Hs molecular function 737 0.0
basal cortex Hs cellular component 737 0.0
metal ion binding Hs molecular function 737 0.0
calcium-induced calcium release activity Hs molecular function 737 0.0
ATPase binding Hs molecular function 737 0.0
phosphoprotein binding Hs molecular function 737 0.0
muscle alpha-actinin binding Hs molecular function 753 0.0
alpha-actinin binding Hs molecular function 753 0.0
ciliary membrane Hs cellular component 753 0.0
extracellular exosome Hs cellular component 1680 0.0
integral component of cytoplasmic side of endoplasmic reticulum membrane Hs cellular component 737 0.0
integral component of lumenal side of endoplasmic reticulum membrane Hs cellular component 737 0.0
mitotic spindle Hs cellular component 737 0.0
non-motile cilium Hs cellular component 753 0.0

GO (InterProScan)

8 results

GO Term Analysis Type e-value
structural molecule activity Pfam molecular function 4.0E-176
calcium ion binding PRINTS molecular function 9.5E-95
protein binding Pfam molecular function 4.0E-176
intracellular protein transport Pfam biological process 4.0E-176
membrane PRINTS cellular component 9.5E-95
vesicle-mediated transport Pfam biological process 4.0E-176
membrane coat Pfam cellular component 2.8E-136
COPI vesicle coat Pfam cellular component 4.0E-176