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GENE CARD

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Gene Card

Best human hits

ZFP36; ZFP36L1; ZFP36L2

Species

B.leachii

Unique Gene ID

Boleac.g00006172

Gene Model ID

Boleac.CG.SB_v3.S26.g06172

Location

S26:116812..119531

Transcript Models and Sequences

  Boleac.CG.SB_v3.S26.g06172.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
Znf_CCCH Pfam Zinc finger, CCCH-type
Znf_CCCH_sf SUPERFAMILY Zinc finger, CCCH-type superfamily
Znf_CCCH SMART Zinc finger, CCCH-type
Znf_CCCH ProSiteProfiles Zinc finger, CCCH-type
Tis11B_N Pfam Tis11B-like protein, N-terminal

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

18 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
P-body Hs cellular component 158 5.83e-45
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 158 5.83e-45
DNA binding Hs molecular function 158 5.83e-45
transcription factor activity, sequence-specific DNA binding Hs molecular function 158 5.83e-45
RNA binding Hs molecular function 158 5.83e-45
mRNA binding Hs molecular function 158 5.83e-45
protein binding Hs molecular function 158 5.83e-45
nucleus Hs cellular component 158 5.83e-45
cytoplasm Hs cellular component 158 5.83e-45
cytosol Hs cellular component 158 5.83e-45
AU-rich element binding Hs molecular function 158 5.83e-45
CCR4-NOT complex Hs cellular component 112 6.77e-28
intracellular ribonucleoprotein complex Hs cellular component 158 5.83e-45
mRNA 3'-UTR AU-rich region binding Hs molecular function 158 5.83e-45
metal ion binding Hs molecular function 158 5.83e-45
RNA polymerase binding Hs molecular function 112 6.77e-28
14-3-3 protein binding Hs molecular function 158 5.83e-45
ribonucleoprotein complex Hs cellular component 112 6.77e-28

GO (InterProScan)

1 result

GO Term Analysis Type e-value
metal ion binding Pfam molecular function 5.4E-11