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GENE CARD

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Gene Card

Best human hits

SMTN; SPECC1; SPECC1L

Species

B.leachii

Unique Gene ID

Boleac.g00006341

Gene Model ID

Boleac.CG.SB_v3.S269.g06341

Location

S269:172280..174468

Transcript Models and Sequences

  Boleac.CG.SB_v3.S269.g06341.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
CH-domain SMART Calponin homology domain
CH_dom_sf Gene3D CH domain superfamily
CH_dom_sf SUPERFAMILY CH domain superfamily
CH-domain ProSiteProfiles Calponin homology domain
CH-domain Pfam Calponin homology domain
CH-domain CDD Calponin homology domain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

13 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
protein binding Hs molecular function
nucleus Hs cellular component
cytoplasm Hs cellular component
spindle Hs cellular component
cytosol Hs cellular component
cytoskeleton Hs cellular component
gap junction Hs cellular component
cell cycle Hs biological process
cell adhesion Hs biological process
actin cytoskeleton Hs cellular component
membrane Hs cellular component
cell junction Hs cellular component
cell division Hs biological process

GO (Blast)

12 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
actin binding Hs molecular function 88.2 1.30e-18
protein binding Hs molecular function 202 4.64e-57
nucleus Hs cellular component 184 3.90e-51
cytoplasm Hs cellular component 202 4.64e-57
spindle Hs cellular component 202 4.64e-57
cytosol Hs cellular component 202 4.64e-57
cytoskeleton Hs cellular component 202 4.64e-57
gap junction Hs cellular component 202 4.64e-57
structural constituent of muscle Hs molecular function 88.2 1.30e-18
actin cytoskeleton Hs cellular component 202 4.64e-57
membrane Hs cellular component 184 3.90e-51
cell junction Hs cellular component 202 4.64e-57

GO (InterProScan)

1 result

GO Term Analysis Type e-value
protein binding CDD molecular function 6.561E-20