Login
Help

GENE CARD

Submit your Data

Gene Card

Best human hits

BRIP1; RTEL1; RTEL1-TNFRSF6B

Species

B.leachii

Unique Gene ID

Boleac.g00006604

Gene Model ID

Boleac.CG.SB_v3.S28.g06604

Location

S28:344529..349922

Transcript Models and Sequences

  Boleac.CG.SB_v3.S28.g06604.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

7 results

IPR Term Analysis Definition
Helicase-like_DEXD_c2 SMART Helicase-like, DEXD box c2 type
Rad3/Chl1-like TIGRFAM ATP-dependent helicase Rad3/Chl1-like
DEAD_2 Pfam DEAD2
ATP-dep_Helicase_C Pfam ATP-dependent helicase, C-terminal
Helic_SF1/SF2_ATP-bd_DinG/Rad3 ProSiteProfiles Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type
ATP-dep_Helicase_C SMART ATP-dependent helicase, C-terminal
P-loop_NTPase SUPERFAMILY P-loop containing nucleoside triphosphate hydrolase

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

19 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleotide binding Hs molecular function 630 0.0
chromosome, telomeric region Hs cellular component 630 0.0
nucleic acid binding Hs molecular function 630 0.0
DNA binding Hs molecular function 630 0.0
chromatin binding Hs molecular function 211 2.74e-56
ATP-dependent DNA helicase activity Hs molecular function 630 0.0
helicase activity Hs molecular function 630 0.0
protein binding Hs molecular function 630 0.0
ATP binding Hs molecular function 630 0.0
nucleus Hs cellular component 630 0.0
nucleoplasm Hs cellular component 630 0.0
cytoplasm Hs cellular component 211 2.74e-56
ATP-dependent helicase activity Hs molecular function 630 0.0
hydrolase activity Hs molecular function 630 0.0
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides Hs molecular function 630 0.0
nuclear membrane Hs cellular component 211 2.74e-56
metal ion binding Hs molecular function 630 0.0
iron-sulfur cluster binding Hs molecular function 630 0.0
4 iron, 4 sulfur cluster binding Hs molecular function 630 0.0

GO (InterProScan)

7 results

GO Term Analysis Type e-value
nucleic acid binding Pfam molecular function 4.0E-50
DNA binding Pfam molecular function 5.2E-51
ATP-dependent DNA helicase activity TIGRFAM molecular function 4.5E-139
ATP binding Pfam molecular function 5.2E-51
nucleobase-containing compound metabolic process Pfam biological process 4.0E-50
ATP-dependent helicase activity Pfam molecular function 4.0E-50
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides SMART molecular function 6.6E-58