Login
Help

GENE CARD

Submit your Data

  1. Gene 'Phmamm.CG.MTP2014.S5...'

Gene Card

Best human hits

FDPS; GGPS1; PDSS1

Species

B.leachii

Unique Gene ID

Boleac.g00007006

Gene Model ID

Boleac.CG.SB_v3.S297.g07006

Location

S297:110402..115426

Transcript Models and Sequences

  Boleac.CG.SB_v3.S297.g07006.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

4 results

IPR Term Analysis Definition
Polyprenyl_synt Pfam Polyprenyl synthetase
Isoprenoid_synthase_dom_sf SUPERFAMILY Isoprenoid synthase domain superfamily
Polyprenyl_synt_CS ProSitePatterns Polyprenyl synthetase, conserved site
Isoprenoid_synthase_dom_sf Gene3D Isoprenoid synthase domain superfamily

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

21 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
protein binding Hs molecular function
cytoplasm Hs cellular component
cytosol Hs cellular component
membrane Hs cellular component
protein polyubiquitination Hs biological process
actin binding Hs molecular function
SH3/SH2 adaptor activity Hs molecular function
nucleus Hs cellular component
endosome Hs cellular component
early endosome Hs cellular component
Golgi apparatus Hs cellular component
cytoskeleton Hs cellular component
microtubule Hs cellular component
plasma membrane Hs cellular component
positive regulation of signal transduction Hs biological process
postsynaptic density Hs cellular component
microtubule cytoskeleton Hs cellular component
cell junction Hs cellular component
cytoplasmic vesicle Hs cellular component
synapse Hs cellular component
postsynaptic membrane Hs cellular component

GO (Blast)

19 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
trans-hexaprenyltranstransferase activity Hs molecular function 37.7 0.006
RNA binding Hs molecular function 295 1.77e-98
dimethylallyltranstransferase activity Hs molecular function 295 1.77e-98
farnesyltranstransferase activity Hs molecular function 45.1 2.32e-05
geranyltranstransferase activity Hs molecular function 295 1.77e-98
protein binding Hs molecular function 45.1 2.32e-05
nucleoplasm Hs cellular component 295 1.77e-98
cytoplasm Hs cellular component 295 1.77e-98
mitochondrion Hs cellular component 295 1.77e-98
mitochondrial matrix Hs cellular component 37.7 0.006
cytosol Hs cellular component 295 1.77e-98
membrane Hs cellular component 295 1.77e-98
integral component of membrane Hs cellular component 295 1.77e-98
transferase activity Hs molecular function 295 1.77e-98
identical protein binding Hs molecular function 45.1 2.32e-05
metal ion binding Hs molecular function 295 1.77e-98
protein heterodimerization activity Hs molecular function 37.7 0.006
trans-octaprenyltranstransferase activity Hs molecular function 37.7 0.006
transferase complex Hs cellular component 37.7 0.006

GO (InterProScan)

1 result

GO Term Analysis Type e-value
isoprenoid biosynthetic process Pfam biological process 2.3E-77