Login
Help

GENE CARD

Submit your Data

  1. Gene 'Moocci.CG.ELv1_2.S65...'

Gene Card

Best human hits

RPL3; RPL3L

Species

B.leachii

Unique Gene ID

Boleac.g00007258

Gene Model ID

Boleac.CG.SB_v3.S302.g07258

Location

S302:134212..137364

Transcript Models and Sequences

  Boleac.CG.SB_v3.S302.g07258.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

3 results

IPR Term Analysis Definition
Ribosomal_L3_CS ProSitePatterns Ribosomal protein L3, conserved site
Transl_B-barrel_sf SUPERFAMILY Translation protein, beta-barrel domain superfamily
Ribosomal_L3 Pfam Ribosomal protein L3

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

22 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
ribosomal large subunit assembly Hs biological process
nuclear-transcribed mRNA catabolic process, nonsense-mediated decay Hs biological process
RNA binding Hs molecular function
structural constituent of ribosome Hs molecular function
protein binding Hs molecular function
intracellular Hs cellular component
nucleus Hs cellular component
nucleolus Hs cellular component
cytoplasm Hs cellular component
cytosol Hs cellular component
ribosome Hs cellular component
focal adhesion Hs cellular component
rRNA processing Hs biological process
translation Hs biological process
translational initiation Hs biological process
SRP-dependent cotranslational protein targeting to membrane Hs biological process
5S rRNA binding Hs molecular function
membrane Hs cellular component
cytosolic large ribosomal subunit Hs cellular component
intracellular ribonucleoprotein complex Hs cellular component
macromolecular complex Hs cellular component
extracellular exosome Hs cellular component

GO (Blast)

16 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
RNA binding Hs molecular function 671 0.0
structural constituent of ribosome Hs molecular function 671 0.0
protein binding Hs molecular function 671 0.0
intracellular Hs cellular component 671 0.0
nucleus Hs cellular component 671 0.0
nucleolus Hs cellular component 671 0.0
cytoplasm Hs cellular component 671 0.0
cytosol Hs cellular component 671 0.0
ribosome Hs cellular component 671 0.0
focal adhesion Hs cellular component 671 0.0
5S rRNA binding Hs molecular function 671 0.0
membrane Hs cellular component 595 0.0
cytosolic large ribosomal subunit Hs cellular component 671 0.0
intracellular ribonucleoprotein complex Hs cellular component 671 0.0
macromolecular complex Hs cellular component 671 0.0
extracellular exosome Hs cellular component 671 0.0

GO (InterProScan)

4 results

GO Term Analysis Type e-value
structural constituent of ribosome Pfam molecular function 4.1E-182
intracellular Pfam cellular component 4.1E-182
ribosome Pfam cellular component 4.1E-182
translation Pfam biological process 4.1E-182