Login
Help

GENE CARD

Submit your Data

Gene Card

Best human hits

LRP1; LRP1B; SSPO

Species

B.leachii

Unique Gene ID

Boleac.g00007750

Gene Model ID

Boleac.CG.SB_v3.S326.g07750

Location

S326:118081..120973

Transcript Models and Sequences

  Boleac.CG.SB_v3.S326.g07750.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

7 results

IPR Term Analysis Definition
LDLR_class-A_CS ProSitePatterns Low-density lipoprotein (LDL) receptor class A, conserved site
LDrepeatLR_classA_rpt SMART Low-density lipoprotein (LDL) receptor class A repeat
LDrepeatLR_classA_rpt Pfam Low-density lipoprotein (LDL) receptor class A repeat
LDrepeatLR_classA_rpt ProSiteProfiles Low-density lipoprotein (LDL) receptor class A repeat
LDL_receptor-like_sf SUPERFAMILY LDL receptor-like superfamily
LDrepeatLR_classA_rpt CDD Low-density lipoprotein (LDL) receptor class A repeat
LDrepeatLR_classA_rpt PRINTS Low-density lipoprotein (LDL) receptor class A repeat

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

35 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
protease binding Hs molecular function 83.2 1.08e-16
RNA binding Hs molecular function 83.2 1.08e-16
receptor activity Hs molecular function 83.2 1.08e-16
low-density lipoprotein receptor activity Hs molecular function 83.2 1.08e-16
scavenger receptor activity Hs molecular function 83.2 1.08e-16
calcium ion binding Hs molecular function 97.1 3.37e-21
protein binding Hs molecular function 97.1 3.37e-21
nucleus Hs cellular component 83.2 1.08e-16
cytoplasm Hs cellular component 83.2 1.08e-16
lysosomal membrane Hs cellular component 83.2 1.08e-16
endosome Hs cellular component 83.2 1.08e-16
early endosome Hs cellular component 83.2 1.08e-16
plasma membrane Hs cellular component 83.2 1.08e-16
integral component of plasma membrane Hs cellular component 83.2 1.08e-16
clathrin-coated pit Hs cellular component 83.2 1.08e-16
focal adhesion Hs cellular component 83.2 1.08e-16
membrane Hs cellular component 97.1 3.37e-21
integral component of membrane Hs cellular component 97.1 3.37e-21
basolateral plasma membrane Hs cellular component 83.2 1.08e-16
alpha-2 macroglobulin receptor activity Hs molecular function 83.2 1.08e-16
clathrin-coated vesicle Hs cellular component 83.2 1.08e-16
apolipoprotein receptor activity Hs molecular function 83.2 1.08e-16
peptidase inhibitor activity Hs molecular function 94.0 3.12e-20
dendrite Hs cellular component 83.2 1.08e-16
endocytic vesicle membrane Hs cellular component 83.2 1.08e-16
clathrin heavy chain binding Hs molecular function 83.2 1.08e-16
apolipoprotein binding Hs molecular function 83.2 1.08e-16
lipoprotein transporter activity Hs molecular function 83.2 1.08e-16
neuronal cell body Hs cellular component 83.2 1.08e-16
receptor complex Hs cellular component 97.1 3.37e-21
heparan sulfate proteoglycan binding Hs molecular function 83.2 1.08e-16
macromolecular complex binding Hs molecular function 83.2 1.08e-16
metal ion binding Hs molecular function 83.2 1.08e-16
lipoprotein particle receptor binding Hs molecular function 83.2 1.08e-16
plasma membrane protein complex Hs cellular component 83.2 1.08e-16

GO (InterProScan)

1 result

GO Term Analysis Type e-value
protein binding PRINTS molecular function 9.3E-25