Aniseed - Gene card

Gene Card

Best human hits

TBX19; TBX21; TBXT

Species

B.leachii

Unique Gene ID

Boleac.g00008688

Gene Model ID

Boleac.CG.SB_v3.S38.g08688

Location

S38:17246..20790

Transcript Models and Sequences

Boleac.CG.SB_v3.S38.g08688.01.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

10 results

IPR Term	Analysis	Definition
TF_T-box	ProSiteProfiles	Transcription factor, T-box
TF_T-box_CS	ProSitePatterns	Transcription factor, T-box, conserved site
TF_T-box	SMART	Transcription factor, T-box
TF_T-box	Pfam	Transcription factor, T-box
TF_T-box	CDD	Transcription factor, T-box
TF_T-box	PANTHER	Transcription factor, T-box
T-box_sf	Gene3D	T-box superfamily
TF_Brachyury	PRINTS	Transcription factor, Brachyury
p53-like_TF_DNA-bd	SUPERFAMILY	p53-like transcription factor, DNA-binding
TF_T-box	PRINTS	Transcription factor, T-box

GOSlim

No result

GO Term	Annotation Origin	Type

GO (Orthology)

No result

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type

GO (Blast)

20 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
chromatin	Hs	cellular component	278	5.51e-90
nuclear chromatin	Hs	cellular component	278	5.51e-90
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Hs	molecular function	278	5.51e-90
RNA polymerase II distal enhancer sequence-specific DNA binding	Hs	molecular function	278	5.51e-90
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function	278	5.51e-90
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding	Hs	molecular function	258	8.23e-82
RNA polymerase II transcription factor binding	Hs	molecular function	278	5.51e-90
RNA polymerase II activating transcription factor binding	Hs	molecular function	278	5.51e-90
enhancer sequence-specific DNA binding	Hs	molecular function	258	8.23e-82
transcriptional repressor activity, RNA polymerase II transcription factor binding	Hs	molecular function	278	5.51e-90
transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding	Hs	molecular function	179	4.01e-51
DNA binding	Hs	molecular function	278	5.51e-90
transcription factor activity, sequence-specific DNA binding	Hs	molecular function	278	5.51e-90
transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding	Hs	molecular function	278	5.51e-90
protein binding	Hs	molecular function	179	4.01e-51
nucleus	Hs	cellular component	278	5.51e-90
cytoplasm	Hs	cellular component	278	5.51e-90
neuronal cell body	Hs	cellular component	179	4.01e-51
sequence-specific DNA binding	Hs	molecular function	278	5.51e-90
transcription regulatory region DNA binding	Hs	molecular function	179	4.01e-51

GO (InterProScan)

3 results

GO Term	Analysis	Type	e-value
transcription factor activity, sequence-specific DNA binding	PANTHER	molecular function	1.7E-110
nucleus	PANTHER	cellular component	1.7E-110
regulation of transcription, DNA-templated	PANTHER	biological process	1.7E-110