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GENE CARD

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Gene Card

Best human hits

SGSM1; SGSM2; TBC1D25

Species

B.leachii

Unique Gene ID

Boleac.g00009053

Gene Model ID

Boleac.CG.SB_v3.S4.g09053

Location

S4:248630..260987

Transcript Models and Sequences

  Boleac.CG.SB_v3.S4.g09053.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
Rab-GTPase_TBC_sf SUPERFAMILY Rab-GTPase-TBC domain superfamily
Rab-GTPase-TBC_dom SMART Rab-GTPase-TBC domain
Rab-GTPase-TBC_dom ProSiteProfiles Rab-GTPase-TBC domain
SGSM1/2 CDD Small G protein signaling modulator 1/2, PH domain
Rab-GTPase-TBC_dom Pfam Rab-GTPase-TBC domain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

14 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
GTPase activator activity Hs molecular function
cytoplasm Hs cellular component
Golgi apparatus Hs cellular component
cytosol Hs cellular component
intracellular protein transport Hs biological process
endomembrane system Hs cellular component
membrane Hs cellular component
Rab GTPase binding Hs molecular function
cytoplasmic vesicle membrane Hs cellular component
regulation of vesicle fusion Hs biological process
cytoplasmic vesicle Hs cellular component
melanosome Hs cellular component
positive regulation of GTPase activity Hs biological process
activation of GTPase activity Hs biological process

GO (Blast)

12 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
GTPase activator activity Hs molecular function 674 0.0
protein binding Hs molecular function 117 5.42e-27
cytoplasm Hs cellular component 674 0.0
autophagosome Hs cellular component 117 5.42e-27
Golgi apparatus Hs cellular component 351 1.51e-104
cytosol Hs cellular component 351 1.51e-104
endomembrane system Hs cellular component 674 0.0
membrane Hs cellular component 351 1.51e-104
Rab GTPase binding Hs molecular function 674 0.0
cytoplasmic vesicle membrane Hs cellular component 351 1.51e-104
cytoplasmic vesicle Hs cellular component 351 1.51e-104
melanosome Hs cellular component 674 0.0

GO (InterProScan)

1 result

GO Term Analysis Type e-value
GTPase activator activity CDD molecular function 4.33443E-78