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GENE CARD

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Gene Card

Best human hits

EDEM1; EDEM2; EDEM3

Species

B.leachii

Unique Gene ID

Boleac.g00009261

Gene Model ID

Boleac.CG.SB_v3.S406.g09261

Location

S406:116432..124797

Transcript Models and Sequences

  Boleac.CG.SB_v3.S406.g09261.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term Analysis Definition
6hp_glycosidase-like_sf Gene3D Six-hairpin glycosidase-like superfamily
Seven-hairpin_glycosidases SUPERFAMILY Seven-hairpin glycosidases
Glyco_hydro_47 PRINTS Glycoside hydrolase family 47
Glyco_hydro_47 Pfam Glycoside hydrolase family 47

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

21 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
Golgi membrane Hs cellular component
catalytic activity Hs molecular function
mannosyl-oligosaccharide 1,2-alpha-mannosidase activity Hs molecular function
calcium ion binding Hs molecular function
protein binding Hs molecular function
endoplasmic reticulum Hs cellular component
endoplasmic reticulum membrane Hs cellular component
N-glycan processing Hs biological process
response to unfolded protein Hs biological process
metabolic process Hs biological process
membrane Hs cellular component
integral component of membrane Hs cellular component
aggresome Hs cellular component
hydrolase activity Hs molecular function
hydrolase activity, acting on glycosyl bonds Hs molecular function
integral component of endoplasmic reticulum membrane Hs cellular component
ubiquitin-dependent ERAD pathway Hs biological process
endoplasmic reticulum quality control compartment Hs cellular component
misfolded protein binding Hs molecular function
ubiquitin-dependent glycoprotein ERAD pathway Hs biological process
mannose trimming involved in glycoprotein ERAD pathway Hs biological process

GO (Blast)

17 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
Golgi membrane Hs cellular component 590 0.0
catalytic activity Hs molecular function 590 0.0
mannosyl-oligosaccharide 1,2-alpha-mannosidase activity Hs molecular function 590 0.0
calcium ion binding Hs molecular function 590 0.0
protein binding Hs molecular function 590 0.0
endoplasmic reticulum Hs cellular component 590 0.0
endoplasmic reticulum lumen Hs cellular component 278 4.02e-84
endoplasmic reticulum membrane Hs cellular component 590 0.0
membrane Hs cellular component 590 0.0
integral component of membrane Hs cellular component 590 0.0
aggresome Hs cellular component 590 0.0
hydrolase activity Hs molecular function 590 0.0
hydrolase activity, acting on glycosyl bonds Hs molecular function 590 0.0
integral component of endoplasmic reticulum membrane Hs cellular component 590 0.0
endoplasmic reticulum quality control compartment Hs cellular component 590 0.0
metal ion binding Hs molecular function 278 4.02e-84
misfolded protein binding Hs molecular function 590 0.0

GO (InterProScan)

4 results

GO Term Analysis Type e-value
catalytic activity Gene3D molecular function 6.4E-116
mannosyl-oligosaccharide 1,2-alpha-mannosidase activity SUPERFAMILY molecular function 4.06E-121
calcium ion binding SUPERFAMILY molecular function 4.06E-121
membrane SUPERFAMILY cellular component 4.06E-121