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GENE CARD

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Gene Card

Best human hits

CDH23; PCDH11Y; PCDHB1

Species

B.leachii

Unique Gene ID

Boleac.g00010042

Gene Model ID

Boleac.CG.SB_v3.S454.g10042

Location

S454:24062..43841

Transcript Models and Sequences

  Boleac.CG.SB_v3.S454.g10042.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

3 results

IPR Term Analysis Definition
Cadherin-like SUPERFAMILY Cadherin-like
Cadherin_CS ProSitePatterns Cadherin conserved site
Cadherin PRINTS Cadherin

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

8 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
calcium ion binding Hs molecular function 56.6 1.60e-09
protein binding Hs molecular function 56.6 1.60e-09
plasma membrane Hs cellular component 56.6 1.60e-09
integral component of plasma membrane Hs cellular component 55.1 5.68e-09
membrane Hs cellular component 56.6 1.60e-09
integral component of membrane Hs cellular component 56.6 1.60e-09
stereocilium Hs cellular component 56.6 1.60e-09
metal ion binding Hs molecular function 56.6 1.60e-09

GO (InterProScan)

4 results

GO Term Analysis Type e-value
calcium ion binding SUPERFAMILY molecular function 8.86E-16
plasma membrane ProSitePatterns cellular component
cell adhesion ProSitePatterns biological process
membrane SUPERFAMILY cellular component 8.86E-16