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GENE CARD

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Gene Card

Best human hits

HNRNPA1; HNRNPA1L2; HNRNPA3

Species

B.leachii

Unique Gene ID

Boleac.g00010182

Gene Model ID

Boleac.CG.SB_v3.S463.g10182

Location

S463:38108..54032

Transcript Models and Sequences

  Boleac.CG.SB_v3.S463.g10182.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
RBD_domain_sf SUPERFAMILY RNA-binding domain superfamily
RRM_dom Pfam RNA recognition motif domain
Nucleotide-bd_a/b_plait_sf Gene3D Nucleotide-binding alpha-beta plait domain superfamily
RRM_dom ProSiteProfiles RNA recognition motif domain
RRM_dom SMART RNA recognition motif domain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

56 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
regulation of alternative mRNA splicing, via spliceosome Hs biological process
mRNA splicing, via spliceosome Hs biological process
nucleic acid binding Hs molecular function
single-stranded DNA binding Hs molecular function
RNA binding Hs molecular function
single-stranded RNA binding Hs molecular function
mRNA binding Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
spliceosomal complex Hs cellular component
cytoplasm Hs cellular component
mRNA processing Hs biological process
RNA export from nucleus Hs biological process
RNA splicing Hs biological process
fibroblast growth factor receptor signaling pathway Hs biological process
membrane Hs cellular component
viral process Hs biological process
RNA metabolic process Hs biological process
protein domain specific binding Hs molecular function
intracellular ribonucleoprotein complex Hs cellular component
negative regulation of telomere maintenance via telomerase Hs biological process
positive regulation of telomere maintenance via telomerase Hs biological process
miRNA binding Hs molecular function
ribonucleoprotein granule Hs cellular component
pre-mRNA binding Hs molecular function
cellular response to glucose starvation Hs biological process
neuron projection Hs cellular component
mRNA transport Hs biological process
RNA transmembrane transporter activity Hs molecular function
nuclear export Hs biological process
nuclear import Hs biological process
telomeric repeat-containing RNA binding Hs molecular function
extracellular exosome Hs cellular component
catalytic step 2 spliceosome Hs cellular component
G-rich strand telomeric DNA binding Hs molecular function
messenger ribonucleoprotein complex Hs cellular component
negative regulation of transcription from RNA polymerase II promoter Hs biological process
chromosome, telomeric region Hs cellular component
mRNA 3'-UTR binding Hs molecular function
extracellular region Hs cellular component
mRNA export from nucleus Hs biological process
inflammatory response Hs biological process
Cajal body Hs cellular component
nuclear matrix Hs cellular component
AU-rich element binding Hs molecular function
protein kinase binding Hs molecular function
primary miRNA processing Hs biological process
response to lipopolysaccharide Hs biological process
single-stranded telomeric DNA binding Hs molecular function
G-quadruplex DNA unwinding Hs biological process
negative regulation of mRNA splicing, via spliceosome Hs biological process
RNA transport Hs biological process
3'-UTR-mediated mRNA stabilization Hs biological process
pre-mRNA intronic binding Hs molecular function
N6-methyladenosine-containing RNA binding Hs molecular function

GO (Blast)

23 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
nucleic acid binding Hs molecular function 233 7.72e-73
single-stranded DNA binding Hs molecular function 233 2.90e-72
RNA binding Hs molecular function 233 7.72e-73
single-stranded RNA binding Hs molecular function 233 2.90e-72
mRNA binding Hs molecular function 231 2.13e-71
protein binding Hs molecular function 233 2.90e-72
nucleus Hs cellular component 233 7.72e-73
nucleoplasm Hs cellular component 233 2.90e-72
spliceosomal complex Hs cellular component 233 7.72e-73
cytoplasm Hs cellular component 233 7.72e-73
membrane Hs cellular component 233 2.90e-72
protein domain specific binding Hs molecular function 233 2.90e-72
intracellular ribonucleoprotein complex Hs cellular component 233 7.72e-73
miRNA binding Hs molecular function 233 2.90e-72
ribonucleoprotein granule Hs cellular component 231 2.13e-71
pre-mRNA binding Hs molecular function 233 2.90e-72
neuron projection Hs cellular component 231 2.13e-71
RNA transmembrane transporter activity Hs molecular function 231 2.13e-71
telomeric repeat-containing RNA binding Hs molecular function 233 2.90e-72
extracellular exosome Hs cellular component 233 2.90e-72
catalytic step 2 spliceosome Hs cellular component 233 2.90e-72
G-rich strand telomeric DNA binding Hs molecular function 233 2.90e-72
messenger ribonucleoprotein complex Hs cellular component 231 2.13e-71

GO (InterProScan)

1 result

GO Term Analysis Type e-value
nucleic acid binding SUPERFAMILY molecular function 8.6E-26

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