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GENE CARD

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Gene Card

Best human hits

IARS; IARS2; VARS2

Species

B.leachii

Unique Gene ID

Boleac.g00010812

Gene Model ID

Boleac.CG.SB_v3.S50.g10812

Location

S50:126199..138314

Transcript Models and Sequences

  Boleac.CG.SB_v3.S50.g10812.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

11 results

IPR Term Analysis Definition
M/V/L/I-tRNA-synth_anticd-bd Pfam Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding
Anticodon_Ile_ABEc CDD Isoleucyl tRNA synthetase type 2, anticodon-binding domain
Val/Leu/Ile-tRNA-synth_edit Gene3D Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain
aa-tRNA-synth_I_CS ProSitePatterns Aminoacyl-tRNA synthetase, class I, conserved site
aa-tRNA-synth_Ia Pfam Aminoacyl-tRNA synthetase, class Ia
Ile-tRNA-ligase PRINTS Isoleucine-tRNA ligase
Ile-tRNA-ligase TIGRFAM Isoleucine-tRNA ligase
Rossmann-like_a/b/a_fold Gene3D Rossmann-like alpha/beta/alpha sandwich fold
Val/Leu/Ile-tRNA-synth_edit SUPERFAMILY Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain
tRNAsynth_Ia_anticodon-bd SUPERFAMILY Aminoacyl-tRNA synthetase, class Ia, anticodon-binding
Ile-tRNA-ligase_type2 Hamap Isoleucine-tRNA ligase, type 2

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

18 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
tRNA binding Hs molecular function
nucleotide binding Hs molecular function
osteoblast differentiation Hs biological process
aminoacyl-tRNA editing activity Hs molecular function
aminoacyl-tRNA ligase activity Hs molecular function
isoleucine-tRNA ligase activity Hs molecular function
protein binding Hs molecular function
ATP binding Hs molecular function
cytoplasm Hs cellular component
cytosol Hs cellular component
translation Hs biological process
tRNA aminoacylation for protein translation Hs biological process
isoleucyl-tRNA aminoacylation Hs biological process
membrane Hs cellular component
ligase activity Hs molecular function
aminoacyl-tRNA synthetase multienzyme complex Hs cellular component
GTPase binding Hs molecular function
extracellular exosome Hs cellular component

GO (Blast)

17 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
tRNA binding Hs molecular function 1184 0.0
nucleotide binding Hs molecular function 1184 0.0
aminoacyl-tRNA editing activity Hs molecular function 1184 0.0
aminoacyl-tRNA ligase activity Hs molecular function 1184 0.0
isoleucine-tRNA ligase activity Hs molecular function 1184 0.0
valine-tRNA ligase activity Hs molecular function 136 3.36e-32
protein binding Hs molecular function 1184 0.0
ATP binding Hs molecular function 1184 0.0
cytoplasm Hs cellular component 1184 0.0
mitochondrion Hs cellular component 252 6.20e-69
mitochondrial matrix Hs cellular component 252 6.20e-69
cytosol Hs cellular component 1184 0.0
membrane Hs cellular component 1184 0.0
ligase activity Hs molecular function 1184 0.0
aminoacyl-tRNA synthetase multienzyme complex Hs cellular component 1184 0.0
GTPase binding Hs molecular function 1184 0.0
extracellular exosome Hs cellular component 1184 0.0

GO (InterProScan)

9 results

GO Term Analysis Type e-value
tRNA binding CDD molecular function 2.28207E-82
nucleotide binding TIGRFAM molecular function 9.2E-259
aminoacyl-tRNA editing activity Gene3D molecular function 4.1E-236
aminoacyl-tRNA ligase activity Pfam molecular function 6.2E-233
isoleucine-tRNA ligase activity TIGRFAM molecular function 9.2E-259
ATP binding TIGRFAM molecular function 9.2E-259
cytoplasm TIGRFAM cellular component 9.2E-259
tRNA aminoacylation for protein translation Gene3D biological process 4.1E-236
isoleucyl-tRNA aminoacylation TIGRFAM biological process 9.2E-259