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GENE CARD

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Gene Card

Best human hits

KHDRBS1; KHDRBS2; KHDRBS3

Species

B.leachii

Unique Gene ID

Boleac.g00011116

Gene Model ID

Boleac.CG.SB_v3.S52.g11116

Location

S52:336900..344400

Transcript Models and Sequences

  Boleac.CG.SB_v3.S52.g11116.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
KH_dom_type_1_sf SUPERFAMILY K Homology domain, type 1 superfamily
KH_dom SMART K Homology domain
KH_dom_type_1 Pfam K Homology domain, type 1
Qua1_dom Pfam KHDRBS, Qua1 domain
KH_dom_type_1_sf Gene3D K Homology domain, type 1 superfamily

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

34 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
G2/M transition of mitotic cell cycle Hs biological process
nucleic acid binding Hs molecular function
DNA binding Hs molecular function
RNA binding Hs molecular function
SH3/SH2 adaptor activity Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
cytoplasm Hs cellular component
cytosol Hs cellular component
transcription, DNA-templated Hs biological process
regulation of transcription, DNA-templated Hs biological process
mRNA processing Hs biological process
cell cycle Hs biological process
cell cycle arrest Hs biological process
signal transduction Hs biological process
cell surface receptor signaling pathway Hs biological process
spermatogenesis Hs biological process
poly(A) binding Hs molecular function
poly(U) RNA binding Hs molecular function
cell proliferation Hs biological process
positive regulation of signal transduction Hs biological process
membrane Hs cellular component
SH3 domain binding Hs molecular function
protein domain specific binding Hs molecular function
SH2 domain binding Hs molecular function
identical protein binding Hs molecular function
negative regulation of transcription, DNA-templated Hs biological process
positive regulation of translational initiation Hs biological process
positive regulation of RNA export from nucleus Hs biological process
protein heterodimerization activity Hs molecular function
regulation of mRNA splicing, via spliceosome Hs biological process
protein oligomerization Hs biological process
Grb2-Sos complex Hs cellular component

GO (Blast)

18 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
nucleic acid binding Hs molecular function 160 2.59e-45
DNA binding Hs molecular function 160 2.59e-45
RNA binding Hs molecular function 160 2.59e-45
SH3/SH2 adaptor activity Hs molecular function 160 2.59e-45
protein binding Hs molecular function 160 2.59e-45
nucleus Hs cellular component 160 2.59e-45
nucleoplasm Hs cellular component 160 2.59e-45
cytoplasm Hs cellular component 160 2.59e-45
cytosol Hs cellular component 160 2.59e-45
poly(A) binding Hs molecular function 160 2.59e-45
poly(U) RNA binding Hs molecular function 160 2.59e-45
membrane Hs cellular component 160 2.59e-45
SH3 domain binding Hs molecular function 160 2.59e-45
protein domain specific binding Hs molecular function 160 2.59e-45
SH2 domain binding Hs molecular function 140 1.66e-38
identical protein binding Hs molecular function 160 2.59e-45
protein heterodimerization activity Hs molecular function 140 1.66e-38
Grb2-Sos complex Hs cellular component 160 2.59e-45

GO (InterProScan)

2 results

GO Term Analysis Type e-value
nucleic acid binding SMART molecular function 3.2E-6
RNA binding Gene3D molecular function 9.3E-40

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