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Gene Card

Best human hits

HMCN1; SEMA5A; THBS1

Species

B.leachii

Unique Gene ID

Boleac.g00012324

Gene Model ID

Boleac.CG.SB_v3.S609.g12324

Location

S609:40414..43664

Transcript Models and Sequences

  Boleac.CG.SB_v3.S609.g12324.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
TSP1_rpt_sf SUPERFAMILY Thrombospondin type-1 (TSP1) repeat superfamily
TSP1_rpt Pfam Thrombospondin type-1 (TSP1) repeat
TSP1_rpt ProSiteProfiles Thrombospondin type-1 (TSP1) repeat
TSP1_rpt SMART Thrombospondin type-1 (TSP1) repeat
TSP1_rpt_sf Gene3D Thrombospondin type-1 (TSP1) repeat superfamily

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

42 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
phosphatidylserine binding Hs molecular function 51.2 1.01e-06
fibronectin binding Hs molecular function 51.2 1.01e-06
integrin binding Hs molecular function 51.2 1.01e-06
calcium ion binding Hs molecular function 51.2 1.01e-06
protein binding Hs molecular function 52.8 3.58e-07
extracellular region Hs cellular component 51.2 1.01e-06
fibrinogen complex Hs cellular component 51.2 1.01e-06
proteinaceous extracellular matrix Hs cellular component 49.3 5.51e-06
basement membrane Hs cellular component 49.3 5.51e-06
extracellular space Hs cellular component 52.8 3.58e-07
cytoplasm Hs cellular component 51.2 1.01e-06
endoplasmic reticulum Hs cellular component 51.2 1.01e-06
endoplasmic reticulum lumen Hs cellular component 51.2 1.01e-06
plasma membrane Hs cellular component 52.8 3.58e-07
cell cortex Hs cellular component 49.3 5.51e-06
heparin binding Hs molecular function 51.2 1.01e-06
external side of plasma membrane Hs cellular component 51.2 1.01e-06
cell surface Hs cellular component 51.2 1.01e-06
membrane Hs cellular component 52.8 3.58e-07
integral component of membrane Hs cellular component 52.8 3.58e-07
sarcoplasmic reticulum Hs cellular component 51.2 1.01e-06
fibroblast growth factor binding Hs molecular function 51.2 1.01e-06
cell junction Hs cellular component 49.3 5.51e-06
secretory granule Hs cellular component 51.2 1.01e-06
low-density lipoprotein particle binding Hs molecular function 51.2 1.01e-06
semaphorin receptor binding Hs molecular function 52.8 3.58e-07
extracellular matrix Hs cellular component 51.2 1.01e-06
platelet alpha granule Hs cellular component 51.2 1.01e-06
platelet alpha granule lumen Hs cellular component 51.2 1.01e-06
cleavage furrow Hs cellular component 49.3 5.51e-06
chondroitin sulfate proteoglycan binding Hs molecular function 52.8 3.58e-07
neuropilin binding Hs molecular function 52.8 3.58e-07
identical protein binding Hs molecular function 51.2 1.01e-06
laminin binding Hs molecular function 51.2 1.01e-06
proteoglycan binding Hs molecular function 51.2 1.01e-06
heparan sulfate proteoglycan binding Hs molecular function 52.8 3.58e-07
syndecan binding Hs molecular function 52.8 3.58e-07
transforming growth factor beta binding Hs molecular function 51.2 1.01e-06
extracellular matrix binding Hs molecular function 51.2 1.01e-06
fibrinogen binding Hs molecular function 51.2 1.01e-06
collagen V binding Hs molecular function 51.2 1.01e-06
extracellular exosome Hs cellular component 52.8 3.58e-07

GO (InterProScan)

No result

GO Term Analysis Type e-value





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