Login
Help

GENE CARD

Submit your Data

  1. Gene 'Boleac.CG.SB_v3.S81....'

Gene Card

Best human hits

CIAO1; KATNB1; WDR33

Species

B.leachii

Unique Gene ID

Boleac.g00014417

Gene Model ID

Boleac.CG.SB_v3.S81.g14417

Location

S81:41390..49226

Transcript Models and Sequences

  Boleac.CG.SB_v3.S81.g14417.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
WD40_repeat ProSiteProfiles WD40 repeat
WD40/YVTN_repeat-like_dom_sf Gene3D WD40/YVTN repeat-like-containing domain superfamily
WD40_repeat Pfam WD40 repeat
WD40_repeat_dom ProSiteProfiles WD40-repeat-containing domain
WD40_repeat_dom_sf SUPERFAMILY WD40-repeat-containing domain superfamily
WD40_repeat SMART WD40 repeat

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

16 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
mRNA splicing, via spliceosome Hs biological process
fibrillar center Hs cellular component
RNA binding Hs molecular function
protein binding Hs molecular function
collagen trimer Hs cellular component
nucleus Hs cellular component
nucleoplasm Hs cellular component
mRNA cleavage and polyadenylation specificity factor complex Hs cellular component
postreplication repair Hs biological process
termination of RNA polymerase II transcription Hs biological process
mRNA polyadenylation Hs biological process
mRNA cleavage Hs biological process
mRNA processing Hs biological process
mRNA export from nucleus Hs biological process
spermatogenesis Hs biological process
mRNA 3'-end processing Hs biological process

GO (Blast)

29 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
spindle pole Hs cellular component 108 3.12e-24
fibrillar center Hs cellular component 534 4.12e-173
RNA binding Hs molecular function 534 4.12e-173
protein binding Hs molecular function 534 4.12e-173
collagen trimer Hs cellular component 534 4.12e-173
nucleus Hs cellular component 534 4.12e-173
nucleoplasm Hs cellular component 534 4.12e-173
cytoplasm Hs cellular component 108 3.12e-24
centrosome Hs cellular component 108 3.12e-24
microtubule organizing center Hs cellular component 108 3.12e-24
spindle Hs cellular component 108 3.12e-24
cytosol Hs cellular component 108 3.12e-24
mRNA cleavage and polyadenylation specificity factor complex Hs cellular component 534 4.12e-173
cytoskeleton Hs cellular component 108 3.12e-24
microtubule Hs cellular component 108 3.12e-24
plasma membrane Hs cellular component 108 3.12e-24
microtubule binding Hs molecular function 108 3.12e-24
katanin complex Hs cellular component 108 3.12e-24
microtubule-severing ATPase activity Hs molecular function 108 3.12e-24
microtubule cytoskeleton Hs cellular component 108 3.12e-24
membrane Hs cellular component 108 3.12e-24
axon Hs cellular component 108 3.12e-24
growth cone Hs cellular component 108 3.12e-24
midbody Hs cellular component 108 3.12e-24
neuronal cell body Hs cellular component 108 3.12e-24
protein heterodimerization activity Hs molecular function 108 3.12e-24
dynein complex binding Hs molecular function 108 3.12e-24
MMXD complex Hs cellular component 91.7 6.56e-20
CIA complex Hs cellular component 91.7 6.56e-20

GO (InterProScan)

1 result

GO Term Analysis Type e-value
protein binding SUPERFAMILY molecular function 1.01E-59