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Gene Card

Best human hits

NKX2-1; NKX2-2; NKX2-4

Species

B.leachii

Unique Gene ID

Boleac.g00015578

Gene Model ID

Boleac.CG.SB_v3.S959.g15578

Location

S959:13435..19674

Transcript Models and Sequences

  Boleac.CG.SB_v3.S959.g15578.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
Homeobox_dom SMART Homeobox domain
Homeobox-like_sf SUPERFAMILY Homeobox-like domain superfamily
Homeobox_dom ProSiteProfiles Homeobox domain
Homeobox_dom CDD Homeobox domain
Homeobox_dom Pfam Homeobox domain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

51 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
negative regulation of transcription from RNA polymerase II promoter Hs biological process
RNA polymerase II regulatory region sequence-specific DNA binding Hs molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function
RNA polymerase II regulatory region DNA binding Hs molecular function
core promoter binding Hs molecular function
intronic transcription regulatory region sequence-specific DNA binding Hs molecular function
neuron migration Hs biological process
DNA binding Hs molecular function
transcription factor activity, sequence-specific DNA binding Hs molecular function
transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
transcription factor complex Hs cellular component
transcription, DNA-templated Hs biological process
regulation of transcription, DNA-templated Hs biological process
regulation of transcription from RNA polymerase II promoter Hs biological process
phospholipid metabolic process Hs biological process
multicellular organism development Hs biological process
pattern specification process Hs biological process
axon guidance Hs biological process
brain development Hs biological process
endoderm development Hs biological process
locomotory behavior Hs biological process
response to hormone Hs biological process
animal organ morphogenesis Hs biological process
positive regulation of gene expression Hs biological process
negative regulation of epithelial to mesenchymal transition Hs biological process
enzyme binding Hs molecular function
telencephalon development Hs biological process
forebrain dorsal/ventral pattern formation Hs biological process
forebrain neuron differentiation Hs biological process
cerebral cortex neuron differentiation Hs biological process
pituitary gland development Hs biological process
telencephalon cell migration Hs biological process
lung development Hs biological process
negative regulation of cell migration Hs biological process
negative regulation of transforming growth factor beta receptor signaling pathway Hs biological process
thyroid gland development Hs biological process
forebrain development Hs biological process
positive regulation of circadian rhythm Hs biological process
sequence-specific DNA binding Hs molecular function
transcription regulatory region DNA binding Hs molecular function
intronic transcription regulatory region DNA binding Hs molecular function
negative regulation of transcription, DNA-templated Hs biological process
positive regulation of transcription, DNA-templated Hs biological process
positive regulation of transcription from RNA polymerase II promoter Hs biological process
rhythmic process Hs biological process
anatomical structure formation involved in morphogenesis Hs biological process
neuron fate commitment Hs biological process
oligodendrocyte differentiation Hs biological process

GO (Blast)

21 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
RNA polymerase II regulatory region sequence-specific DNA binding Hs molecular function 135 3.79e-35
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 135 3.79e-35
core promoter proximal region sequence-specific DNA binding Hs molecular function 101 5.55e-24
RNA polymerase II regulatory region DNA binding Hs molecular function 135 3.79e-35
core promoter binding Hs molecular function 135 3.79e-35
intronic transcription regulatory region sequence-specific DNA binding Hs molecular function 135 3.79e-35
DNA binding Hs molecular function 135 3.79e-35
chromatin binding Hs molecular function 101 5.55e-24
transcription factor activity, sequence-specific DNA binding Hs molecular function 135 3.79e-35
transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding Hs molecular function 135 3.79e-35
transcription coactivator activity Hs molecular function 101 5.55e-24
protein binding Hs molecular function 135 3.79e-35
intracellular Hs cellular component 101 5.55e-24
nucleus Hs cellular component 135 3.79e-35
nucleoplasm Hs cellular component 135 3.79e-35
transcription factor complex Hs cellular component 135 3.79e-35
transcription factor binding Hs molecular function 101 5.55e-24
enzyme binding Hs molecular function 135 3.79e-35
sequence-specific DNA binding Hs molecular function 135 3.79e-35
transcription regulatory region DNA binding Hs molecular function 135 3.79e-35
intronic transcription regulatory region DNA binding Hs molecular function 135 3.79e-35

GO (InterProScan)

1 result

GO Term Analysis Type e-value
DNA binding SUPERFAMILY molecular function 7.7E-12

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