Aniseed - Gene card

Gene Card

Best human hits

FKBP3; GTDC1; POLR2E

Species

B.leachii

Unique Gene ID

Boleac.g00015786

Gene Model ID

Boleac.CG.SB_v3.S99.g15786

Location

S99:61222..69339

Transcript Models and Sequences

Boleac.CG.SB_v3.S99.g15786.01.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

13 results

IPR Term	Analysis	Definition
RNA_pol_Rpb5_N	Pfam	RNA polymerase, Rpb5, N-terminal
GlycosylTrfase_1_N	Pfam	Glycosyltransferase family 1, N-terminal
RNA_pol_subH/Rpb5_C	Pfam	RNA polymerase, subunit H/Rpb5 C-terminal
RPB5-like	SUPERFAMILY	RPB5-like RNA polymerase subunit
RNA_pol_subH/Rpb5_C	ProDom	RNA polymerase, subunit H/Rpb5 C-terminal
Glyco_trans_1	Pfam	Glycosyl transferase, family 1
RPB5-like	Gene3D	RPB5-like RNA polymerase subunit
PPIase_FKBP_dom	Pfam	FKBP-type peptidyl-prolyl cis-trans isomerase domain
RNA_pol_subH/Rpb5_CS	ProSitePatterns	RNA polymerase, subunit H/Rpb5, conserved site
PPIase_FKBP_dom	ProSiteProfiles	FKBP-type peptidyl-prolyl cis-trans isomerase domain
RNA_pol_Rpb5_N_sf	SUPERFAMILY	RNA polymerase Rpb5, N-terminal domain superfamily
RpoH/RPB5	Hamap	Archaeal RpoH /eukaryotic RPB5 RNA polymerase subunit
RNA_pol_Rpb5_N_sf	Gene3D	RNA polymerase Rpb5, N-terminal domain superfamily

GOSlim

No result

GO Term	Annotation Origin	Type

GO (Orthology)

2 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
transferase activity	Hs	molecular function
transferase activity, transferring glycosyl groups	Hs	molecular function

GO (Blast)

20 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
RNA polymerase I activity	Hs	molecular function	379	2.26e-127
RNA polymerase II activity	Hs	molecular function	379	2.26e-127
RNA polymerase III activity	Hs	molecular function	379	2.26e-127
DNA binding	Hs	molecular function	379	2.26e-127
RNA binding	Hs	molecular function	234	6.72e-72
peptidyl-prolyl cis-trans isomerase activity	Hs	molecular function	234	6.72e-72
DNA-directed 5'-3' RNA polymerase activity	Hs	molecular function	379	2.26e-127
receptor activity	Hs	molecular function	234	6.72e-72
protein binding	Hs	molecular function	379	2.26e-127
FK506 binding	Hs	molecular function	234	6.72e-72
nucleus	Hs	cellular component	379	2.26e-127
nucleoplasm	Hs	cellular component	379	2.26e-127
DNA-directed RNA polymerase II, core complex	Hs	cellular component	379	2.26e-127
DNA-directed RNA polymerase III complex	Hs	cellular component	379	2.26e-127
DNA-directed RNA polymerase I complex	Hs	cellular component	379	2.26e-127
cytoplasm	Hs	cellular component	234	6.72e-72
cytosol	Hs	cellular component	379	2.26e-127
transferase activity	Hs	molecular function	204	6.55e-58
transferase activity, transferring glycosyl groups	Hs	molecular function	204	6.55e-58
isomerase activity	Hs	molecular function	234	6.72e-72

GO (InterProScan)

4 results

GO Term	Analysis	Type	e-value
DNA binding	Gene3D	molecular function	1.2E-57
DNA-directed 5'-3' RNA polymerase activity	Gene3D	molecular function	1.2E-57
nucleus	Gene3D	cellular component	1.2E-57
transcription, DNA-templated	Gene3D	biological process	1.2E-57