Aniseed - Gene card

Gene 'Boschl.CG.Botznik201...'

Gene Card

Best human hits

UBR1; UBR2; UBR3

Species

B.schlosseri

Unique Gene ID

Boschl.g00034016

Gene Model ID

Boschl.CG.Botznik2013.chr1.g34016

Location

chr1:9839791..9843331

Transcript Models and Sequences

Boschl.CG.Botznik2013.chr1.g34016.01.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

1 result

IPR Term	Analysis	Definition
WH_DNA-bd_sf	SUPERFAMILY	Winged helix DNA-binding domain superfamily

GOSlim

No result

GO Term	Annotation Origin	Type

GO (Orthology)

26 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
ubiquitin ligase complex	Hs	cellular component
protein polyubiquitination	Hs	biological process
proteasome complex	Hs	cellular component
chromatin	Hs	cellular component
ubiquitin-protein transferase activity	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
cytoplasm	Hs	cellular component
cytosol	Hs	cellular component
chromatin silencing	Hs	biological process
ubiquitin-dependent protein catabolic process	Hs	biological process
reciprocal meiotic recombination	Hs	biological process
male meiotic nuclear division	Hs	biological process
male meiosis I	Hs	biological process
spermatogenesis	Hs	biological process
zinc ion binding	Hs	molecular function
negative regulation of transposition	Hs	biological process
protein ubiquitination	Hs	biological process
transferase activity	Hs	molecular function
protein catabolic process	Hs	biological process
negative regulation of TOR signaling	Hs	biological process
histone H2A ubiquitination	Hs	biological process
metal ion binding	Hs	molecular function
ubiquitin protein ligase activity	Hs	molecular function
leucine binding	Hs	molecular function
ubiquitin-dependent protein catabolic process via the N-end rule pathway	Hs	biological process

GO (Blast)

15 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
ubiquitin ligase complex	Hs	cellular component	397	2.45e-116
proteasome complex	Hs	cellular component	362	2.25e-104
chromatin	Hs	cellular component	397	2.45e-116
ubiquitin-protein transferase activity	Hs	molecular function	397	2.45e-116
protein binding	Hs	molecular function	397	2.45e-116
nucleus	Hs	cellular component	397	2.45e-116
cytoplasm	Hs	cellular component	397	2.45e-116
cytosol	Hs	cellular component	397	2.45e-116
zinc ion binding	Hs	molecular function	397	2.45e-116
membrane	Hs	cellular component	67.0	5.81e-11
integral component of membrane	Hs	cellular component	67.0	5.81e-11
transferase activity	Hs	molecular function	397	2.45e-116
metal ion binding	Hs	molecular function	397	2.45e-116
ubiquitin protein ligase activity	Hs	molecular function	397	2.45e-116
leucine binding	Hs	molecular function	397	2.45e-116

GO (InterProScan)

No result

GO Term	Analysis	Type	e-value