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GENE CARD

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Gene Card

Best human hits

CWC22; NOM1

Species

B.schlosseri

Unique Gene ID

Boschl.g00039778

Gene Model ID

Boschl.CG.Botznik2013.chr1.g39778

Location

chr1:5272763..5280739

Transcript Models and Sequences

  Boschl.CG.Botznik2013.chr1.g39778.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term Analysis Definition
MIF4-like_sf Gene3D MIF4G-like domain superfamily
Initiation_fac_eIF4g_MI Pfam Initiation factor eIF-4 gamma, MA3
Initiation_fac_eIF4g_MI SMART Initiation factor eIF-4 gamma, MA3
Initiation_fac_eIF4g_MI ProSiteProfiles Initiation factor eIF-4 gamma, MA3

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

12 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
RNA binding Hs molecular function 451 1.95e-151
binding Hs molecular function 451 1.95e-151
protein binding Hs molecular function 451 1.95e-151
nucleus Hs cellular component 451 1.95e-151
nucleoplasm Hs cellular component 451 1.95e-151
spliceosomal complex Hs cellular component 451 1.95e-151
nucleolus Hs cellular component 75.9 1.06e-14
cytosol Hs cellular component 451 1.95e-151
nuclear speck Hs cellular component 451 1.95e-151
U2-type catalytic step 1 spliceosome Hs cellular component 451 1.95e-151
U2-type catalytic step 2 spliceosome Hs cellular component 451 1.95e-151
catalytic step 2 spliceosome Hs cellular component 451 1.95e-151

GO (InterProScan)

No result

GO Term Analysis Type e-value