Login
Help

GENE CARD

Submit your Data

Gene Card

Best human hits

AL136295.5; RNF19B; RNF31

Species

B.schlosseri

Unique Gene ID

Boschl.g00025619

Gene Model ID

Boschl.CG.Botznik2013.chr10.g25619

Location

chr10:19574292..19584893

Transcript Models and Sequences

  Boschl.CG.Botznik2013.chr10.g25619.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

8 results

IPR Term Analysis Definition
IBR_dom Pfam IBR domain
RNF31-UBA Pfam E3 ubiquitin-protein ligase RNF31, UBA-like domain
IBR_dom SMART IBR domain
PUB-like_dom_sf SUPERFAMILY PUB-like domain superfamily
PUB_domain Pfam PUB domain
RNF31 PANTHER E3 ubiquitin-protein ligase RNF31
Znf_RING/FYVE/PHD Gene3D Zinc finger, RING/FYVE/PHD-type
Znf_RING ProSiteProfiles Zinc finger, RING-type

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

18 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
protein polyubiquitination Hs biological process
ubiquitin-protein transferase activity Hs molecular function
protein binding Hs molecular function
cytoplasm Hs cellular component
cytosol Hs cellular component
I-kappaB kinase/NF-kappaB signaling Hs biological process
cytoplasmic side of plasma membrane Hs cellular component
protein ubiquitination Hs biological process
transferase activity Hs molecular function
ubiquitin protein ligase binding Hs molecular function
CD40 receptor complex Hs cellular component
positive regulation of I-kappaB kinase/NF-kappaB signaling Hs biological process
ubiquitin binding Hs molecular function
metal ion binding Hs molecular function
T cell receptor signaling pathway Hs biological process
positive regulation of NF-kappaB transcription factor activity Hs biological process
LUBAC complex Hs cellular component
protein linear polyubiquitination Hs biological process

GO (Blast)

19 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
ubiquitin ligase complex Hs cellular component 59.3 1.28e-08
ubiquitin-protein transferase activity Hs molecular function 358 2.72e-105
protein binding Hs molecular function 358 2.72e-105
cytoplasm Hs cellular component 358 2.72e-105
endoplasmic reticulum Hs cellular component 59.3 1.28e-08
endoplasmic reticulum membrane Hs cellular component 59.3 1.28e-08
cytosol Hs cellular component 358 2.72e-105
cytoplasmic side of plasma membrane Hs cellular component 358 2.72e-105
membrane Hs cellular component 59.3 1.28e-08
integral component of membrane Hs cellular component 59.3 1.28e-08
transferase activity Hs molecular function 358 2.72e-105
ubiquitin conjugating enzyme binding Hs molecular function 59.3 1.28e-08
ubiquitin protein ligase binding Hs molecular function 358 2.72e-105
CD40 receptor complex Hs cellular component 358 2.72e-105
ubiquitin binding Hs molecular function 358 2.72e-105
cytolytic granule Hs cellular component 59.3 1.28e-08
metal ion binding Hs molecular function 358 2.72e-105
ubiquitin protein ligase activity Hs molecular function 59.3 1.28e-08
LUBAC complex Hs cellular component 358 2.72e-105

GO (InterProScan)

2 results

GO Term Analysis Type e-value
ubiquitin-protein transferase activity PANTHER molecular function 4.5E-218
LUBAC complex PANTHER cellular component 4.5E-218