Gene Card
Best human hits
PRDM6; PRDM7; PRDM9
Species
Unique Gene ID
Boschl.g00047196
Gene Model ID
Boschl.CG.Botznik2013.chr10.g47196
Location
chr10:10436732..10454816
Transcript Models and Sequences
n/a
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The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
9 results
| IPR Term | Analysis | Definition |
|---|---|---|
| Znf_C2H2_type | ProSitePatterns | Zinc finger C2H2-type |
| Znf_C2H2_sf | SUPERFAMILY | Zinc finger C2H2 superfamily |
| Znf_C2H2_type | ProSiteProfiles | Zinc finger C2H2-type |
| Ig-like_fold | Gene3D | Immunoglobulin-like fold |
| SET_dom | Pfam | SET domain |
| Znf_C2H2_type | SMART | Zinc finger C2H2-type |
| SET_dom | SMART | SET domain |
| SET_dom | ProSiteProfiles | SET domain |
| Ig-like_dom_sf | SUPERFAMILY | Immunoglobulin-like domain superfamily |
| GO Term | Annotation Origin | Type |
|---|
GO (Orthology)
20 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|---|---|
| RNA polymerase II transcription factor activity, sequence-specific DNA binding | Hs | molecular function |
| nucleic acid binding | Hs | molecular function |
| protein binding | Hs | molecular function |
| intracellular | Hs | cellular component |
| nucleus | Hs | cellular component |
| nucleoplasm | Hs | cellular component |
| chromosome | Hs | cellular component |
| meiotic gene conversion | Hs | biological process |
| chromatin organization | Hs | biological process |
| transcription, DNA-templated | Hs | biological process |
| regulation of transcription, DNA-templated | Hs | biological process |
| regulation of transcription from RNA polymerase II promoter | Hs | biological process |
| methyltransferase activity | Hs | molecular function |
| positive regulation of reciprocal meiotic recombination | Hs | biological process |
| transferase activity | Hs | molecular function |
| histone-lysine N-methyltransferase activity | Hs | molecular function |
| methylation | Hs | biological process |
| histone lysine methylation | Hs | biological process |
| metal ion binding | Hs | molecular function |
| meiotic cell cycle | Hs | biological process |
GO (Blast)
12 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| RNA polymerase II transcription factor activity, sequence-specific DNA binding | Hs | molecular function | 113 | 7.89e-27 |
| nucleic acid binding | Hs | molecular function | 154 | 5.97e-40 |
| protein binding | Hs | molecular function | 154 | 5.97e-40 |
| intracellular | Hs | cellular component | 154 | 5.97e-40 |
| nucleus | Hs | cellular component | 154 | 5.97e-40 |
| nucleoplasm | Hs | cellular component | 154 | 5.97e-40 |
| chromosome | Hs | cellular component | 154 | 5.97e-40 |
| methyltransferase activity | Hs | molecular function | 154 | 5.97e-40 |
| transferase activity | Hs | molecular function | 154 | 5.97e-40 |
| histone-lysine N-methyltransferase activity | Hs | molecular function | 154 | 5.97e-40 |
| protein homodimerization activity | Hs | molecular function | 140 | 6.64e-36 |
| metal ion binding | Hs | molecular function | 154 | 5.97e-40 |
GO (InterProScan)
2 results
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| nucleic acid binding | SMART | molecular function | 1.7E-4 |
| protein binding | SMART | molecular function | 4.5E-7 |
