Gene Card
Best human hits
LARP6; LARP7; SSB
Species
Unique Gene ID
Boschl.g00022161
Gene Model ID
Boschl.CG.Botznik2013.chr12.g22161
Location
chr12:15353029..15364655
Transcript Models and Sequences
n/a
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The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
6 results
| IPR Term | Analysis | Definition |
|---|---|---|
| La_HTH | Pfam | La-type HTH domain |
| Lupus_La | PRINTS | Lupus La protein |
| WH_DNA-bd_sf | SUPERFAMILY | Winged helix DNA-binding domain superfamily |
| La_HTH | SMART | La-type HTH domain |
| La_HTH | ProSiteProfiles | La-type HTH domain |
| WH-like_DNA-bd_sf | Gene3D | Winged helix-like DNA-binding domain superfamily |
| GO Term | Annotation Origin | Type |
|---|
GO (Orthology)
14 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|---|---|
| nucleic acid binding | Hs | molecular function |
| RNA binding | Hs | molecular function |
| protein binding | Hs | molecular function |
| nucleus | Hs | cellular component |
| cytoplasm | Hs | cellular component |
| polysome | Hs | cellular component |
| RNA processing | Hs | biological process |
| regulation of translation | Hs | biological process |
| myosin binding | Hs | molecular function |
| intracellular ribonucleoprotein complex | Hs | cellular component |
| RNA stem-loop binding | Hs | molecular function |
| positive regulation of translation | Hs | biological process |
| mRNA 5'-UTR binding | Hs | molecular function |
| sequence-specific mRNA binding | Hs | molecular function |
GO (Blast)
17 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| tRNA binding | Hs | molecular function | 53.1 | 1.86e-07 |
| nuclear chromosome, telomeric region | Hs | cellular component | 53.1 | 1.86e-07 |
| nucleic acid binding | Hs | molecular function | 159 | 1.65e-43 |
| RNA binding | Hs | molecular function | 159 | 1.65e-43 |
| mRNA binding | Hs | molecular function | 53.1 | 1.86e-07 |
| protein binding | Hs | molecular function | 159 | 1.65e-43 |
| nucleus | Hs | cellular component | 159 | 1.65e-43 |
| nucleoplasm | Hs | cellular component | 63.5 | 1.24e-10 |
| cytoplasm | Hs | cellular component | 159 | 1.65e-43 |
| cytosol | Hs | cellular component | 63.5 | 1.24e-10 |
| polysome | Hs | cellular component | 159 | 1.65e-43 |
| poly(U) RNA binding | Hs | molecular function | 53.1 | 1.86e-07 |
| myosin binding | Hs | molecular function | 159 | 1.65e-43 |
| intracellular ribonucleoprotein complex | Hs | cellular component | 159 | 1.65e-43 |
| RNA stem-loop binding | Hs | molecular function | 159 | 1.65e-43 |
| mRNA 5'-UTR binding | Hs | molecular function | 159 | 1.65e-43 |
| sequence-specific mRNA binding | Hs | molecular function | 159 | 1.65e-43 |
GO (InterProScan)
3 results
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| RNA binding | PRINTS | molecular function | 1.7E-5 |
| nucleus | PRINTS | cellular component | 1.7E-5 |
| RNA processing | PRINTS | biological process | 1.7E-5 |
