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GENE CARD

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Gene Card

Best human hits

DDX58; DHX58; IFIH1

Species

B.schlosseri

Unique Gene ID

Boschl.g00065520

Gene Model ID

Boschl.CG.Botznik2013.chr12.g65520

Location

chr12:1909180..1923552

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

17 results

IPR Term Analysis Definition
AAA+_ATPase SMART AAA+ ATPase domain
P-loop_NTPase SUPERFAMILY P-loop containing nucleoside triphosphate hydrolase
Prot_kinase_dom ProSiteProfiles Protein kinase domain
Prot_kinase_dom Pfam Protein kinase domain
Helicase_ATP-bd ProSiteProfiles Helicase superfamily 1/2, ATP-binding domain
Helicase_C ProSiteProfiles Helicase, C-terminal
KEN_dom Pfam KEN domain
Helicase_C SMART Helicase, C-terminal
Prot_kinase_dom SMART Protein kinase domain
KEN_sf Gene3D KEN domain superfamily
Helicase_ATP-bd SMART Helicase superfamily 1/2, ATP-binding domain
Helicase_C CDD Helicase, C-terminal
KEN_dom ProSiteProfiles KEN domain
Helicase_C Pfam Helicase, C-terminal
Helicase/UvrB_N Pfam Helicase/UvrB, N-terminal
Kinase-like_dom_sf SUPERFAMILY Protein kinase-like domain superfamily
PUB_domain SMART PUB domain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

27 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleotide binding Hs molecular function 226 1.15e-60
nucleic acid binding Hs molecular function 226 1.15e-60
DNA binding Hs molecular function 169 1.55e-42
double-stranded DNA binding Hs molecular function 226 1.15e-60
RNA binding Hs molecular function 226 1.15e-60
double-stranded RNA binding Hs molecular function 226 1.15e-60
single-stranded RNA binding Hs molecular function 226 1.15e-60
helicase activity Hs molecular function 226 1.15e-60
protein binding Hs molecular function 226 1.15e-60
ATP binding Hs molecular function 226 1.15e-60
nucleus Hs cellular component 169 1.55e-42
cytoplasm Hs cellular component 226 1.15e-60
cytosol Hs cellular component 226 1.15e-60
cytoskeleton Hs cellular component 226 1.15e-60
plasma membrane Hs cellular component 226 1.15e-60
bicellular tight junction Hs cellular component 226 1.15e-60
zinc ion binding Hs molecular function 226 1.15e-60
actin cytoskeleton Hs cellular component 226 1.15e-60
membrane Hs cellular component 226 1.15e-60
hydrolase activity Hs molecular function 226 1.15e-60
cell junction Hs cellular component 226 1.15e-60
ubiquitin protein ligase binding Hs molecular function 226 1.15e-60
ruffle membrane Hs cellular component 226 1.15e-60
identical protein binding Hs molecular function 226 1.15e-60
cell projection Hs cellular component 226 1.15e-60
ribonucleoprotein complex binding Hs molecular function 169 1.55e-42
metal ion binding Hs molecular function 226 1.15e-60

GO (InterProScan)

7 results

GO Term Analysis Type e-value
DNA binding Pfam molecular function 2.9E-17
ATP binding Pfam molecular function 2.9E-17
hydrolase activity Pfam molecular function 2.9E-17
ribonuclease activity Pfam molecular function 3.7E-15
protein kinase activity Pfam molecular function 2.5E-7
mRNA processing Pfam biological process 3.7E-15
protein phosphorylation Pfam biological process 2.5E-7